Gene Syncc9605_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2230 
Symbol 
ID3735422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2045128 
End bp2045856 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content53% 
IMG OID637776818 
Producthypothetical protein 
Protein accessionYP_382524 
Protein GI78213745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.135698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00939678 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCTGCC CACAAATCCC AACCGACTGG CATCCATCGA CCTACGCCGT CGACGAGTTC 
AGCAAGGTGG TGTGGAAGCA AGGCAGCTAT GCCGTTGCCA TGGGTCTGAA GGGCAAAAAA
GAAACCCTTA TTCCTGGCTG CGTCATTCAG CTCTGCACCC GTAAGGAATT GGTCGGCATC
CGCAACCGCA TCAAAGTTGA GGAAGCTCGG CGTGATTCTG AATTCTTCAC CCCTGAAGAA
GAGCAGGAGC TGGGCAGGAT GTTTGCCGAT GGGTGGATGA GACGGAGGCC CGAGAAGCAG
GCACCAAAAC AGGGAACTTC TAAGGGGCAA CAAGAGAACA AGGGAATAAG CGTCTGGCTT
ATCCCCGTTG TCTTTGGCTC GATTGGGATT GCACCCGGCC TTCTCTGGAC GGGCTTAGTT
ACCGCTCGAA ACTTTGACGC CCACAGAGCC GCTAAGCGTC CAGCCATCGA CAGCAGCTCA
CGGTTAGAAG CCAAAGCTGA GTGCGAGCAG TTCATCAAGA CTCTCCAGGG GGACTGGGAA
TGCAAATACT TCGACAAAGT TCTTGAGTGG AACCTCGAAT ACAGAAAAAA CAAGCTTCTG
ACATGGCTGT TCCGCCCGGA GAACGGCCCT CTCCTGAAAT TCGAAGAAAT CGGGATCTAC
ACAGCTAGTG AGATCACATC TGATGACTCC ATTGGAGAAG ATGCCAAGAG CTGGCACTTT
GAGAAGTAA
 
Protein sequence
MTCPQIPTDW HPSTYAVDEF SKVVWKQGSY AVAMGLKGKK ETLIPGCVIQ LCTRKELVGI 
RNRIKVEEAR RDSEFFTPEE EQELGRMFAD GWMRRRPEKQ APKQGTSKGQ QENKGISVWL
IPVVFGSIGI APGLLWTGLV TARNFDAHRA AKRPAIDSSS RLEAKAECEQ FIKTLQGDWE
CKYFDKVLEW NLEYRKNKLL TWLFRPENGP LLKFEEIGIY TASEITSDDS IGEDAKSWHF
EK