Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2188 |
Symbol | |
ID | 3735400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 2002892 |
End bp | 2004412 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637776776 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_382482 |
Protein GI | 78213703 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.929468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCCA TCCGTCCCGA CGAGATCAGC GCCATCCTCA AGAAGCAGAT TGAGGACTAC GACAAGTCGG TTTCCGTCAG CAATGTCGGC ACCGTTCTGA CCGTGGGCGA CGGCATCGCC CGCGTTTACG GCCTGCAGCA AGCCATGGCC GGCGAACTTA TTGAATTTGA GGACGGCACT GAAGGCATCG CCCTGAACCT CGAAGACGAC AACGTCGGCG CGGTGCTGAT GGGTGAGGGC TACGGCATTC AGGAAGGCAG CACGGTGAAG GCCACCGGCA AAATCGCTGC TGTGCCCGTG GGTGAAGCCA TGTTGGGCCG GGTGGTGAAC TCCCTGGGCC GCGCCATCGA CGGCAAGGGC GAAATCGCCA CCAGCGAGAC GCGCCTGATC GAATCCATGG CTCCCGGCAT CATTCAGCGC AAATCGGTGC ACGAGCCGAT GCAGACCGGC ATCACCGCCA TCGACGCGAT GATCCCTGTC GGCCGTGGCC AGCGTGAGCT GATCATTGGT GACCGCCAGA CCGGCAAGAC CGCCATCGCG ATCGACACGA TCCTGAATCA GGCGGATCAG GACATGATCT GCGTCTACGT CGCTGTGGGT CAGAAGGCTG CTTCAGTGGC CAACGTCGTT GAAGTGCTGC GTGAGCGCGG CGCCCTCGAC TACACCGTGA TCGTGGCAGC CAACGCCTCC GAGCCCGCTG CGCTGCAGTA CCTGGCTCCC TACACCGGCG CCACCATTGC CGAGTACTTC ATGTACAAGG GCAAGGCCAC CTTGGTGATC TACGACGATC TCTCCAAGCA GGCTGCTGCT TACCGCCAGA TGTCGCTCCT GCTGCGTCGT CCGCCCGGTC GTGAGGCCTA CCCCGGCGAC GTCTTCTACT GCCACAGCCG TCTGCTCGAG CGTGCAGCCA AGCTGTCTGA CGCCATGGGC AAGGGTTCCA TGACTGCCCT GCCGATCATC GAGACCCAGG CCGGTGATGT GTCGGCTTAC ATCCCCACCA ACGTGATTTC GATCACGGAT GGTCAGATCT TCCTCAGCTC CGACCTGTTC AACTCCGGTC TGCGTCCTGC GATCAACGTG GGTATCTCCG TGAGCCGGGT GGGTGGTGCT GCCCAGACCA AGGCCATCAA GAAGATTGCC GGCACCTTGA AACTGGAGCT GGCCCAGTTC GACGAGCTGG CCGCCTTCTC CCAGTTCGCT TCTGACCTGG ACGCCTCCAC TCAGCAGCAA CTGGAGCGCG GCAAGCGCCT GCGTGAGCTG CTCAAACAGC CTCAGTTCAG CCCCCTGATC CTGGCTGAGC AGGTTGCCAT CGTTTACGCC GGTGTGAAGG GCCTAATCGA CGACGTTCCC GTTGACAAGG TTGTCGACTT CTCCCGTGAA CTGCGTGAGT ACCTCAAGTC CAACAAGGCT GAGTTCATTA CCGAAATCCA AGAGAAGAAA GTGATGAGCC CTGAGGCTGA GGCGATCCTC AAGGACGCCA TCACCGAAGT TGTGTCCACC ATGGTCGCCT CTGCGGCCTG A
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Protein sequence | MVSIRPDEIS AILKKQIEDY DKSVSVSNVG TVLTVGDGIA RVYGLQQAMA GELIEFEDGT EGIALNLEDD NVGAVLMGEG YGIQEGSTVK ATGKIAAVPV GEAMLGRVVN SLGRAIDGKG EIATSETRLI ESMAPGIIQR KSVHEPMQTG ITAIDAMIPV GRGQRELIIG DRQTGKTAIA IDTILNQADQ DMICVYVAVG QKAASVANVV EVLRERGALD YTVIVAANAS EPAALQYLAP YTGATIAEYF MYKGKATLVI YDDLSKQAAA YRQMSLLLRR PPGREAYPGD VFYCHSRLLE RAAKLSDAMG KGSMTALPII ETQAGDVSAY IPTNVISITD GQIFLSSDLF NSGLRPAINV GISVSRVGGA AQTKAIKKIA GTLKLELAQF DELAAFSQFA SDLDASTQQQ LERGKRLREL LKQPQFSPLI LAEQVAIVYA GVKGLIDDVP VDKVVDFSRE LREYLKSNKA EFITEIQEKK VMSPEAEAIL KDAITEVVST MVASAA
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