Gene Syncc9605_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2120 
Symbol 
ID3737741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1942126 
End bp1942878 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content60% 
IMG OID637776707 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_382414 
Protein GI78213635 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCG ATCACGGAGA GCTGCTGTAC GAAGGCAAGG CCAAGCGGGT GTTCGCGAGC 
ACGGATCCCG ACCGGGTGCT GGTGGAGTTC AAGAACGATG CCACCGCCTT CAATGCTCAG
AAGAAAGCTC AGCTGGATGG CAAAGGTCGG CTGAACTGCC AAATCTCAGC GCGGTTGTTC
GACCTGCTGG AGCGTGAGGG GGTGCCGACC CACTACTGCG GTCTGGCTGG GGAGACCTGG
ATGCTGGTGC GCCGGGTGAG GATCATCCCC CTGGAGGTAG TTCTTCGGAA CATCGCCACC
GGTTCGCTGT GTCGTCAGAC GCCGATCGCT GAGGGCACAG CCATCGAACC TGCCCTGTTG
GATCTGTATT ACAAGGACGA TTCCCTCGGC GATCCGTTGT TGACCGAGGC TCGTGTGCAG
CTGCTCGGGG TGGCAGACAC CGCACAACTG TCAGCGATTG AACAACTGGC CCGCCGGGTG
AACGCGGTCT TGCTCCCGTT TTTTGACGAA CTTGATCTGC AGCTGGTCGA TTTCAAGCTG
GAGTTGGGGC TGGCATCGGA TGGAACACTC CTGCTGGCCG ACGAGATCAG TCCTGACACC
TGCAGGCTCT GGGACCGCCG TAATAGCAAC GCCGAAGACC GGATTTTGGA CAAGGACCGC
TTCCGCAAAG ATCTCGGTGG GGTGATGGAG GCCTACGGGG AGGTCCTCAA ACGGGTCCAA
GGCAACTGCC CCAACCCCCG TAACTGCCTG TAA
 
Protein sequence
MMPDHGELLY EGKAKRVFAS TDPDRVLVEF KNDATAFNAQ KKAQLDGKGR LNCQISARLF 
DLLEREGVPT HYCGLAGETW MLVRRVRIIP LEVVLRNIAT GSLCRQTPIA EGTAIEPALL
DLYYKDDSLG DPLLTEARVQ LLGVADTAQL SAIEQLARRV NAVLLPFFDE LDLQLVDFKL
ELGLASDGTL LLADEISPDT CRLWDRRNSN AEDRILDKDR FRKDLGGVME AYGEVLKRVQ
GNCPNPRNCL