| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2087 |
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| Symbol | sdhA |
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| ID | 3736274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1911043 |
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| End bp | 1912962 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637776674 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_382382 |
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| Protein GI | 78213603 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG GACTTCCTGA TCCAAGGATT CCCGCCGAGC CGCTCACCAG TGCCTGGCAA
CGCACCCGCG AGGGGCTGCC GCTGATCAGC CCTCTGCGCA AAGGGCAGAT GGATGTGCTT
GTGGTGGGCA CCGGCCTGGC GGGGGCTTCC GCTGCTGCAA CGCTGGCCCA ACAAGGCTAC
CGGGTCACAG TGCTCAGCTT TCACGACAGC CCGCGGCGGG CCCATTCGGT GGCAGCCCAG
GGGGGCATCA ACGCCGCACG TTCCGTGGCG GTGGATGGCG ACAGCGTCAG TCGCCTGTTC
GCCGACACCC TCAAGGGGGG TGACTTCCGA GCCCGGGAAG CAGGCTGCCA ACGGCTGGCG
GAAATCAGCA GCGGCATCAT CGATCAATGT GTGGCTCAGG GGGTGCCGTT CGCACGCGAA
TACGGCGGCA GCCTGGCCAC CCGCAGTTTT GGCGGAGCCC TGGTAAGCCG CACCTTCTAT
GCCCGGGGAC AGACCGGCCA GCAATTGCTC TACGGCGCTT ACCAGGCCTT GATGCGCCAG
GTGGAGCTGG GTCGCGTTCA ATTGCTCACC CGCCGTGACG TGCTCGAGCT GATCACCGTG
GATGGGGTCG CCCGCGGTGC GGTGGCGCGC CATCTGCTGA GCGGTGAATT GGAGGTGCAC
ACCGCCCGCA CGGTTCTGCT CTGCACGGGT GGTTACAGCA ACGTCTACTT CCTCTCCACC
AACGCGCTGA AATCGAACAC CAGTGCGATC TGGAGGGCTC ACCGCAAAGG TGCGCTGTTC
GCTAACCCCT GTTTCACGCA GATTCACCCC ACCTGCATCC CCAGTGGAGA TCTCTTCCAG
AGCAAGCTGA CGCTGATGAG CGAAAGCCTG CGCAACGACG GTCGGGTCTG GCTGCCCAAA
ACCCCTGGCG ATGCACGTCA ACCCGAGGCA ATCCCTGAAG AGGAACGCGA CTACTTCCTC
GAGAGGCTCT ATCCCACCTA CGGCAACATG ACCCCGAGGG ATGTCGCCTC CAGGAGGGCC
AGAGAACTCT GCAACGCGGG GCAGGGTGTT GGCCCAGGGG GGCGGTCGGT GTACCTCGAC
CTCACCGATG CCATCGAAGC CGAAGGCAAA GACGCCATTG CTGCCCGCTA CGGCAACCTG
ATGACGATGT ATGAGCGCAT CAGCGGCGAC GACCCGTACA AAAAACCGAT GCGGATCTAC
CCCGCCCCCC ACTACACGAT GGGCGGCCTC TGGGTGGATT ACCACCTGAT GAGTTCGATC
CCCGGCCTGT TTGTTCTGGG GGAAGCGAAC TACTCCGAAC ATGGCGCCAA CCGCCTCGGC
GCCAGCGCCC TGATGCAGGG GCTTGCCGAT GGCTACTTCA TCGCGCCATC CACCGTCACG
GCCTGGCTGG CGGGCACACC AGCCGAGGAT GTGGCGACCG ATCACCCGGC CTGCCGAGAG
GCCTTGGAAA GCACCCGGCG CCGCATCAGC CACTTGCTCA ACAGCGAAGG CAACACTCCG
GTGGACAGCT TCCATCGCGA GCTGGGCAGC GTGATGATCG ACCGCTGCGG CATCAGCCGC
CATGCCGATG GTCTGGCGCA AGGGCTGGAG CAGGTGAAGG CGCTGGAGGA GCGGTTTGAG
GCCGAGGTGA GGGTGCCCGG CGAAGCCAGC GGCCCCAATG CCGAGCTGGA GAAAGCCCTG
CGGGTCAAGG ACTTCTTCGG GCTGGCCCAG CTGATGCTGC GGGATGCCCT GGCCCGCGAG
GAGTCGTGCG GCGCCCACTT CCGTGAGGAA CACCAAAGTG ACGAGGGTGA AGCCCAACGG
GACGACGTCA ACTTCGCGCA CATCGCGGCC TGGGAACACA AGGCCGACGG TGAGCCGATC
TGCCACAGCG AACCGCTGCA GTTCAACGCG CTGCAACCCA GCACCCGGAG CTACAAATGA
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| Protein sequence | MTNGLPDPRI PAEPLTSAWQ RTREGLPLIS PLRKGQMDVL VVGTGLAGAS AAATLAQQGY
RVTVLSFHDS PRRAHSVAAQ GGINAARSVA VDGDSVSRLF ADTLKGGDFR AREAGCQRLA
EISSGIIDQC VAQGVPFARE YGGSLATRSF GGALVSRTFY ARGQTGQQLL YGAYQALMRQ
VELGRVQLLT RRDVLELITV DGVARGAVAR HLLSGELEVH TARTVLLCTG GYSNVYFLST
NALKSNTSAI WRAHRKGALF ANPCFTQIHP TCIPSGDLFQ SKLTLMSESL RNDGRVWLPK
TPGDARQPEA IPEEERDYFL ERLYPTYGNM TPRDVASRRA RELCNAGQGV GPGGRSVYLD
LTDAIEAEGK DAIAARYGNL MTMYERISGD DPYKKPMRIY PAPHYTMGGL WVDYHLMSSI
PGLFVLGEAN YSEHGANRLG ASALMQGLAD GYFIAPSTVT AWLAGTPAED VATDHPACRE
ALESTRRRIS HLLNSEGNTP VDSFHRELGS VMIDRCGISR HADGLAQGLE QVKALEERFE
AEVRVPGEAS GPNAELEKAL RVKDFFGLAQ LMLRDALARE ESCGAHFREE HQSDEGEAQR
DDVNFAHIAA WEHKADGEPI CHSEPLQFNA LQPSTRSYK
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