| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2038 |
|---|
| Symbol | |
|---|
| ID | 3737714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1859363 |
|---|
| End bp | 1860205 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637776624 |
|---|
| Product | polysaccharide ABC transporter |
|---|
| Protein accession | YP_382333 |
|---|
| Protein GI | 78213554 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.567975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATA TTATGATCTT TCTTAGAAGA TTTTTGGCTG CAATGGCGAG ACAGATTTCG
ACAATCCTTG CTCTCGCGGC CTATGAGAAC GATCGGAAAT CAACCAGTAG CTCAGTTGGC
TCTTGGGAGA GTCTGATTAA TCCGTTGCAG ATCATGCTGT TCTTTATCGG GATCCGTATT
GGATTTCGAT ATCTGATGTC TGGTGGGTCG TTAGGTGGTA GTGCTACAAG CCTATATTTC
AACATTGTTA TTTTTATGGC TGCTGGGTTT ACAATTTATT TTCCTTTTAG ACAGCTGGCT
ATACAAGCAC TATCCGGCTT GAAATTGAGA TCTCCGTTAT ATTACAAGCG TATTGAGCCG
CTGGACATAC TTTTAGCTTT GTCACTCAAC AATGTTAGGG CTTTGTTGAC CCTCACTCTT
GGCCTTATGG CACTGATATG GGGTCTTACA TGGGATTTTC GAATGGACAG TCCTGGGTTG
GCTCTGTGCA TTTATCTGCT AACTGTTGTG ATGGCAATAG GATTTGGTAT CTGTCTTGTC
TTTCTTGGTA GTTACAACAA ATTTATTACT CGGTTGATTA AACGTCTTAT TAATCGTATT
CTTATTTTTA CATCCGGTCT GTTTTTCGCC ACTTTTGAGC TCCCCTTGTA TTCAAGGCCA
TTTGTTACAT GGAATCCTGT TCTTCATGCA GTTGAGCTTT TCCGGTATTC TCTAAATAAT
GAATACCCAA TTCCTGATAT TTCATTGTCA TACCTCATTT GGTGTTCACT GATACTTTTA
GGATTTTCCC TGATTCTTTA TAGGACGAAT GAGTCCTTGC TCCTTGAGTC AGTTGATGAC
TAA
|
|---|
| Protein sequence | MDNIMIFLRR FLAAMARQIS TILALAAYEN DRKSTSSSVG SWESLINPLQ IMLFFIGIRI
GFRYLMSGGS LGGSATSLYF NIVIFMAAGF TIYFPFRQLA IQALSGLKLR SPLYYKRIEP
LDILLALSLN NVRALLTLTL GLMALIWGLT WDFRMDSPGL ALCIYLLTVV MAIGFGICLV
FLGSYNKFIT RLIKRLINRI LIFTSGLFFA TFELPLYSRP FVTWNPVLHA VELFRYSLNN
EYPIPDISLS YLIWCSLILL GFSLILYRTN ESLLLESVDD
|
|---|
| |