Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1990 |
Symbol | |
ID | 3737438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1808394 |
End bp | 1809065 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637776576 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_382286 |
Protein GI | 78213507 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.445693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.238348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGTC TTCGTTCCTG GGCGCTGCTG CTGCTCATCC CTCTGTTGGT GAGTTGCAGC CCTTCCCCGC GCGCTTCGGT GGTGACCGGC TGTGCTGATG CTCAGGCGGC CTGCCTGCAG GGCCTGGCCA CGGTCACCAT GCAGACGAGC CAGGGCGAGT TTACGATTGA AGTGAATGGC GATTCCGCTC CCCTCACCTC CGGCAATTTC ATCGATCTGG TGCGGCGCGG CACCTACGAC GGAACCATGT TTCATCGCGT TGTTCGCGAG CCCGTTCCCT TTGTGGTGCA GGGGGGCGAT CCGCAATCCA GTGATCGATC GGTTCCCTTG GGGCAGCTCG GCACCGGCAG TTTTGTGGAT CCAGACAACG GCCAGGCGCG GATGATCCCG CTTGAGATCA AGTTCCGATC CGAGCCGCAG CCCCGCTACA GCAGGGTCAT CACCAATCCG GCGGAACTTG ATGGCCTGGA GTTGACCCAC GAGCGTGGAG CGGTGGCCAT GGCCCGCTCC CAGGCTCCTG ATTCCGCTAG TGCCCAGTTC TATGTGGCCT TGCGTCCCTT GCCGGAACTC GACGGCCGAT ACGCCGTCTT CGGCCGTGTA GTCGATGGCA TTGAGATGGT GGACGCGATC CAACAGGGAG ATCGCATCGC CAAGGCGGTG TTAAAGGAGT GA
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Protein sequence | MRRLRSWALL LLIPLLVSCS PSPRASVVTG CADAQAACLQ GLATVTMQTS QGEFTIEVNG DSAPLTSGNF IDLVRRGTYD GTMFHRVVRE PVPFVVQGGD PQSSDRSVPL GQLGTGSFVD PDNGQARMIP LEIKFRSEPQ PRYSRVITNP AELDGLELTH ERGAVAMARS QAPDSASAQF YVALRPLPEL DGRYAVFGRV VDGIEMVDAI QQGDRIAKAV LKE
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