Gene Syncc9605_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1990 
Symbol 
ID3737438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1808394 
End bp1809065 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID637776576 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_382286 
Protein GI78213507 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.445693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.238348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTC TTCGTTCCTG GGCGCTGCTG CTGCTCATCC CTCTGTTGGT GAGTTGCAGC 
CCTTCCCCGC GCGCTTCGGT GGTGACCGGC TGTGCTGATG CTCAGGCGGC CTGCCTGCAG
GGCCTGGCCA CGGTCACCAT GCAGACGAGC CAGGGCGAGT TTACGATTGA AGTGAATGGC
GATTCCGCTC CCCTCACCTC CGGCAATTTC ATCGATCTGG TGCGGCGCGG CACCTACGAC
GGAACCATGT TTCATCGCGT TGTTCGCGAG CCCGTTCCCT TTGTGGTGCA GGGGGGCGAT
CCGCAATCCA GTGATCGATC GGTTCCCTTG GGGCAGCTCG GCACCGGCAG TTTTGTGGAT
CCAGACAACG GCCAGGCGCG GATGATCCCG CTTGAGATCA AGTTCCGATC CGAGCCGCAG
CCCCGCTACA GCAGGGTCAT CACCAATCCG GCGGAACTTG ATGGCCTGGA GTTGACCCAC
GAGCGTGGAG CGGTGGCCAT GGCCCGCTCC CAGGCTCCTG ATTCCGCTAG TGCCCAGTTC
TATGTGGCCT TGCGTCCCTT GCCGGAACTC GACGGCCGAT ACGCCGTCTT CGGCCGTGTA
GTCGATGGCA TTGAGATGGT GGACGCGATC CAACAGGGAG ATCGCATCGC CAAGGCGGTG
TTAAAGGAGT GA
 
Protein sequence
MRRLRSWALL LLIPLLVSCS PSPRASVVTG CADAQAACLQ GLATVTMQTS QGEFTIEVNG 
DSAPLTSGNF IDLVRRGTYD GTMFHRVVRE PVPFVVQGGD PQSSDRSVPL GQLGTGSFVD
PDNGQARMIP LEIKFRSEPQ PRYSRVITNP AELDGLELTH ERGAVAMARS QAPDSASAQF
YVALRPLPEL DGRYAVFGRV VDGIEMVDAI QQGDRIAKAV LKE