Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1983 |
Symbol | |
ID | 3736380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1802886 |
End bp | 1803578 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637776568 |
Product | pseudouridine synthase, Rsu |
Protein accession | YP_382279 |
Protein GI | 78213500 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0680971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGTGGT CAACCTGTGG AGGATGCGCG AAAACGCAAG CTGACTTGAC GACGCTGCTG CTGAACAAGC CCTACGGGGT TTTGAGTCAA TTCACGTCGG AGGAGGGAAG CCGCTGGCGT TGCCTGAGCG ACTTTGTTGA TGTGCCCCAG GTGTACGCCG CGGGGCGACT CGATGCCGAC AGCGAAGGGT TGCTGATCCT CACCAGCAAC GGCCGACTGC AACAGCGCCT CACCGACCCT CGCTTTGGCC ACTGGCGCAG CTACTGGGCG CAGGTGGAAG GAACTCCCAA CACCGAACAA CTGCAACAGC TCTGCGATGG CGTTGTGGTT CAGGGGCGCC GCACCTTGCC AGCAAAAGCG CGCTGGCTTC AGGGCCAGGA CCTACCGCAG TTGCCCGAAC GAACACCTCA AATTCGTTTT CGAGCTGCGA TTCCCACCAA TTGGTTGCAA CTGTCCCTCA GCGAGGGGCG CAACCGGCAG GTGCGCCGGA TGACGGCGGC TGTTGGCCTG CCGACGTTGC GTCTGGTGCG TTGCTGCATC GATCTGATGG ACAACGGCCC ACCGCTGGAC CTCACGGGCC TTCAACCCGG CAGTTGGCGT ACGGTGACGG CAGCTGAACA GGAACGGCTA AACCGCCTAA TCAGCAGCAG CTCGAGCGCT GGCCCTCGGA GGGGAGGGCA CCGACGAGGG TGA
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Protein sequence | MAWSTCGGCA KTQADLTTLL LNKPYGVLSQ FTSEEGSRWR CLSDFVDVPQ VYAAGRLDAD SEGLLILTSN GRLQQRLTDP RFGHWRSYWA QVEGTPNTEQ LQQLCDGVVV QGRRTLPAKA RWLQGQDLPQ LPERTPQIRF RAAIPTNWLQ LSLSEGRNRQ VRRMTAAVGL PTLRLVRCCI DLMDNGPPLD LTGLQPGSWR TVTAAEQERL NRLISSSSSA GPRRGGHRRG
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