| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1866 |
|---|
| Symbol | lpxD |
|---|
| ID | 3736438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1696634 |
|---|
| End bp | 1697710 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637776451 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| Protein accession | YP_382164 |
|---|
| Protein GI | 78213385 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACGA TCCGCCGGAC TGCCCTGGCC TCCATGCGTT TCAGCACCCT GATCAAGGTT
CTGCAGACCG GTGATGCAGG CCTGCGTTGG AGCCAGGCGG GGTTGGACCC ATGGCTTGAG
GGTGCCGCTT CCCTCGATCA GGCCTCAGCG GCGCAGCTCA GCTTTCTGGA GAAGGGCAAC
GCCCTCACGG CGGCTCTGGG CGCCAGCGGT GTGGGTGCCC TGTTGCTGCC CGACCAACAG
GATTTGATTG ATCTGGCGTC GCAGCGTGGC ATCGCCTTTG CGGTCTTCGC CGATCCGCGT
CTGGCCTTTG CTGAAGCCCT CGATCAGTTG TATCCCCGCC GCCGGCCCTT GGCGGAGATT
CACCCCTCGG CGGTGATCGA TGAACGGGCT GTGGTCGGGC CCGGCACAGC GGTGGGCCCG
CGGGTCTGCA TCGGGGAGGG AAGCCGTCTT GGCGCCGACT GCATCGTTCA CCCCGGGGTG
GTGATCTACG ACGACGTGGT GGTGGGTGAT GGCTGCGAGC TGCACGCCAA TGCCGTGCTT
CACCCCGGCA GCCGACTGGG CCGTGGCTGT GTGGTGAACT CCAATGCCGT TGTCGGCTCC
GAGGGATTCG GCTTTGTGCC GACGGCGAAG GGCTGGCGAA AAATGCCGCA GACCGGCCAG
GTGGTTCTTG AGGACGGCGT TGAGGTGGGT TGCGGCACCA CCATCGATCG CCCGTCTGTC
GGGGAGACCC GCATTGGTGC CGGCACCAAG ATCGACAACC TTGTGCAGAT CGGTCATGGC
GTCACCACCG GCCGTGGCTG TGCCTTCGCC TCCCAGGTGG GCATCGCAGG CGGCGCCCGG
ATTGGCCACG GGGTGATCCT GGCCGGCCAG GTGGGGGTTG CCAATCGCGC TGTGGTGGGA
GACCGCGCCA TCGCCAGCTC CAAGAGCGGC ATTCACGGTG ATGTGGCCCC TGGAGAGGTG
GTGAGTGGCT TCCCCGCGAT CCCCAACCGC CTCTGGCTCC GTTGCGCCAA CACCTTCAGC
AAGTTGCCGG AGATGGCCAA AACCCTGCGG GAGCTCAAGC GGGACACCCC TCAGTAA
|
|---|
| Protein sequence | MSTIRRTALA SMRFSTLIKV LQTGDAGLRW SQAGLDPWLE GAASLDQASA AQLSFLEKGN
ALTAALGASG VGALLLPDQQ DLIDLASQRG IAFAVFADPR LAFAEALDQL YPRRRPLAEI
HPSAVIDERA VVGPGTAVGP RVCIGEGSRL GADCIVHPGV VIYDDVVVGD GCELHANAVL
HPGSRLGRGC VVNSNAVVGS EGFGFVPTAK GWRKMPQTGQ VVLEDGVEVG CGTTIDRPSV
GETRIGAGTK IDNLVQIGHG VTTGRGCAFA SQVGIAGGAR IGHGVILAGQ VGVANRAVVG
DRAIASSKSG IHGDVAPGEV VSGFPAIPNR LWLRCANTFS KLPEMAKTLR ELKRDTPQ
|
|---|
| |