Gene Syncc9605_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1848 
Symbol 
ID3736859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1684301 
End bp1684918 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID637776435 
Producthypothetical protein 
Protein accessionYP_382148 
Protein GI78213369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00971553 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAC GGCTTTTTTT TCCGGCCACG GAACGCAATC GCGGTCCCAT CGGAGACCTG 
CTGCGCCAGC TGTTGCCCGC CTCAGGAGCT GTGCTGGAAC TGGCCAGCGG CAGTGGTGAG
CATGCCGTCT GCTTTCAGCA GCGTTTCCCC CATCTGCTTT GGCAGGCCAG CGATCCAGAT
CCAGACCATC GCGCCAGCAT CAACGCCTGG ATCCAGCACC AGGGTCTGAG CCCGGTGATG
CCAGAAGCTC TCAACCTTGA TGTTGAAAGG CAGCCCTGGC CCCTCCCCCA GAAGGTCCGA
GCGGCATTGA ACGCTGTGGT TTGCATCAAT CTGCTGCATA TCAGTCCGGC CAGCTGCACG
GATGCCGTCT TCAAAGAATC CGCCCAGCTG CTGCCCAGCG GAGCCCCCTT GATCATTTAT
GGCCCGTTCA TGCGCAATGG GGCTCACACG AGTGCAAGCA ATGCCGCCTT CGACCAATCC
CTGAAGGAAC GCAACCATCT GTGGGGATTG AGAGAACTGA ACCAGGTGAC AGCCGTTGCC
GCCAAGGCAG GCTTCAAAAC CGGCGACGTG GTCTCCATGC CAGCGAACAA CTTTACGATC
GTCCTAAGTC GCAAATAA
 
Protein sequence
MDQRLFFPAT ERNRGPIGDL LRQLLPASGA VLELASGSGE HAVCFQQRFP HLLWQASDPD 
PDHRASINAW IQHQGLSPVM PEALNLDVER QPWPLPQKVR AALNAVVCIN LLHISPASCT
DAVFKESAQL LPSGAPLIIY GPFMRNGAHT SASNAAFDQS LKERNHLWGL RELNQVTAVA
AKAGFKTGDV VSMPANNFTI VLSRK