Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1841 |
Symbol | |
ID | 3736852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1679363 |
End bp | 1680319 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637776428 |
Product | hypothetical protein |
Protein accession | YP_382141 |
Protein GI | 78213362 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0091091 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAC TGGCAGAAAT GAACTGGCGA TCCACCTCAA GCATGAGCCA GTCCAGCGAC CACGACATGA CAGCCGTTCT CGAGGCCATC GATCACTACA GCGATGGCGA TGTTGACCGT CCGCAGGAAA TCATGGTGGA ACTGCAGGAG GGATTTTCCA ACAAGCACAA ACGGCTGAAC AAAAAGGTCT ACGAAAAAGA GCTGGCCAAA CTCCAGACGG AACTGGTCAA AATGCAGTAC TGGGTGAAAG CCACCGGCTT TCGCATGATC ATCCTGTTTG AAGGGCGAGA CGCCGCAGGC AAGGGAGGGT CGATCAAACG GCTGACTGAG CCCTTGAACC CAAGGGGATG TCGAGTGGTG GCCCTGGGCA CGCCTTCCGA GCATCAGAAA AGCCAGTGGT ACTTCCAGCG CTATGTGGAG CATTTTCCAA GTGCTGGAGA AATCGTTGTT TTTGACCGGA GCTGGTACAA CCGCGCCGGT GTGGAAAAGG TGATGGGCTT CGCGACACGC GAACAGGTGG AGCAGTTTTA TGTCTCGTGC CCACAATTTG AGCAAATGCT GGTGCAGGAC GGAATCCTGC TGCTCAAATA CTGGTTCTCC ATTAACGATG ATGAACAGGA GAAGCGTTTC CAGGAACGCA TTGATAACGA AGAGCGTCGC TGGAAGATGA GTCCGATGGA CATCGAGTCA CGCAACCGCT GGGTGGAGTA TTCGAAAGCA AAGGACACCA TGTTTGCCAA GACGCACATC CCGGAAGCCC CATGGTTCAC CGTGGAGGCC AATGACAAGC GCCGCGCGCG CCTGAATTGC CTGCGTCACA TTCTCAGCAA GGTGCCCTAC GAAGACATGA CACCTCCACC CATCAAGATG CCCAAGCGCC CAAAGCAAGG AAGCTACAAA CGGCCTCCTT TTAACGAGCA ATTCTTTGTT CCAAACAACT ATCCCTACAA GGACTAA
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Protein sequence | MTSLAEMNWR STSSMSQSSD HDMTAVLEAI DHYSDGDVDR PQEIMVELQE GFSNKHKRLN KKVYEKELAK LQTELVKMQY WVKATGFRMI ILFEGRDAAG KGGSIKRLTE PLNPRGCRVV ALGTPSEHQK SQWYFQRYVE HFPSAGEIVV FDRSWYNRAG VEKVMGFATR EQVEQFYVSC PQFEQMLVQD GILLLKYWFS INDDEQEKRF QERIDNEERR WKMSPMDIES RNRWVEYSKA KDTMFAKTHI PEAPWFTVEA NDKRRARLNC LRHILSKVPY EDMTPPPIKM PKRPKQGSYK RPPFNEQFFV PNNYPYKD
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