| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1712 |
|---|
| Symbol | |
|---|
| ID | 3737293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1567088 |
|---|
| End bp | 1568404 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637776302 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_382016 |
|---|
| Protein GI | 78213237 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.427184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0140181 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAACGC TGATGCCTGG CTCCAAATAC TTCAAAGCCA AGAGGCAATG GAGGTTGAGT
AATGGGGGCA CGCTGAGGCT CATCCACATA GATGCTGGAG ACGCCTTTAA CAAGATTCAG
GGTGAAGACC TCAGCCACAT TTTTTGGGAC AAGCTGGGGC AGGAATCAGA CCCACAAGTG
GTGCTGAGGG CTAGGTCATC GATGCGGACC ACAGACCCAA CAGTGGTGCC GAAGTTCATT
GCGACGGCTA ACCCTTTGGG TCCAGGCAGC TGGTGGATTC GGGATTACGT CGTCACCAAG
GCGCTGCCCA ATCGAATCTT CAATTGTGAG TTCTTTGGTG CCCAGCCTGC GGTCTGGGTG
AAGTCCACCC TGCGGGACAA CCCGTATCTC TCCAATCCTG ATCAATACGA GGCAGAACTA
CGCGCCAGTT GCTTTGGCGA TGAATCAAAC ATTGCCGCAG AAGTCCTAGG TGAATGGGGT
CAGGTCACTG CTGGATTTTT TGGTTCTTGC CTGAGTATTG AACGGTCGAT GCTGCCCCGT
GATTTCGAGG TGCCGTGGCT TGCCGATAGT GACGGGCAAC TGAGATACGA GACGAAGGCG
AAGCACTGCT GGATTGGCGG GGACTGGGGC ACTGCATCGC CAGCCTGCGT CGTACTCATG
AGTCAACTGC AAGAGCCGAT GTCGATTGCA GGGAAACATC TCGCGCGGGG CAGTTGGGTT
TGTGTTGATG CGGAATATGT ATACGGCGTT CAGCCAGACG GTTCAAAGGA ATGGAATCGT
GGTGATCGCA CTTTGACTGC CCCGCAGTTC GTTGAGCGGG TGAAGACGTT GTATCAGCGG
CATGGCTTCC CGAAAGGTGC CATTTCGCCC CGCAGAACGG TTATGGATTC AGCGGTTACT
GCGCAATTGG GGTTTGGTGG TTATTCCGAA CCCGTGACGT TGAGCACTGA ATTCAAGAAA
TATGGATGGC AGGTAACTGG CAGCCCGAAA AGCAGCAGGG CAGTGGGTTG GCAGTTGATG
AAGTCGTTGC TGTGGCAAGC GGGCAGTGAT CAGCCGGGAC TGTTCATTTC TGAACGATGC
GAAAGCCTAT GGGCAACGCT TCCGTATTGC ATTAGCGACG ATAAAAACCC TGAGGACATG
GAAAAGGCGG CGCCTGACCA CTCAGCTGAC GCGGTGAGGT ATGTGCTGAC TGCAGCCAAT
CAAAAGCAGC ACAACTTCAG AGGTGGAACG AAGTCAGGAC CGCATCCATT GATGTGGGCA
GAGGACAGGA AGCGGGCAGT TGTAGCGCGT GGGTTGAAGG TGGTTGGTCG CTGGTGA
|
|---|
| Protein sequence | MPTLMPGSKY FKAKRQWRLS NGGTLRLIHI DAGDAFNKIQ GEDLSHIFWD KLGQESDPQV
VLRARSSMRT TDPTVVPKFI ATANPLGPGS WWIRDYVVTK ALPNRIFNCE FFGAQPAVWV
KSTLRDNPYL SNPDQYEAEL RASCFGDESN IAAEVLGEWG QVTAGFFGSC LSIERSMLPR
DFEVPWLADS DGQLRYETKA KHCWIGGDWG TASPACVVLM SQLQEPMSIA GKHLARGSWV
CVDAEYVYGV QPDGSKEWNR GDRTLTAPQF VERVKTLYQR HGFPKGAISP RRTVMDSAVT
AQLGFGGYSE PVTLSTEFKK YGWQVTGSPK SSRAVGWQLM KSLLWQAGSD QPGLFISERC
ESLWATLPYC ISDDKNPEDM EKAAPDHSAD AVRYVLTAAN QKQHNFRGGT KSGPHPLMWA
EDRKRAVVAR GLKVVGRW
|
|---|
| |