Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1629 |
Symbol | |
ID | 3735549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1499299 |
End bp | 1500678 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637776217 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_381933 |
Protein GI | 78213154 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.46186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAAA CCATCACCAG TCAACGGCCC TTCGAGGCCA ACCGGGATGC GGAGAGCCCC AATCGCAACC TGACCCCGAT CACCACAGAA CTCGACGGCA CCGACCGTCT TGTGGTTGGG GGGTGTCGTC TCAGCGATCT AGCCGAGCGG TACTGCACAC CTTTGTATGT GCTGGATGAA GCCACCGTTC GGGCCACCTG CCGCGCCTAC CGCGAGGCTC TGAACAAGCA TTACGCCGGG CCGTCCCTGC CGATCTACGC CTCCAAGGCC AACAGCTCCC TGGTGATGAG CAGCCTGGCG GCCTCCGAGG GGCTGGGGCT GGATGCCGTG TCCGCCGGTG AATTGCTGAC GGCCCTGCGG GGGGGTATGC CCGGGGATCG CATGGTGCTG CACGGCAACA ACAAATCCGA CGAAGAGCTG CTGCTCGCCT ACGCAAACAA GGTGACGATC GTGGTGGACA ACCAGCACGA CCTCGACCGC CTCGCTGAAC TGGTTCCTGC GGGATCGGAA CCGGCTCGCC TGATGCTGCG GTTCACCCCC GGCATCGAGT GCCACACGCA CGAATACATT CGCACCGGTC ACCTGGACAG CAAGTTCGGC TTCGATCCCG ACCAGGTGGA ACCTGTGCTG CGCAGCCTGG TGGGACAACC CTGGGCCCAG CTCACCGGGC TGCATGCCCA CATCGGATCC CAGATTTTTG AACTCGAGCC CCACCGGGAT CTGGCGGCGG TGATGGCCGA CAAGTTGAAG CTGGCCCGTG ACCTGGGCCA TCCCGTGACC GACCTCAACG TGGGCGGTGG CCTGGGCATC CGCTACGTGG AGTCGGACGA CCCCCCGAGC ATTGAGCAGT GGATCAAGGT GGTGGCCGAG GCTGTCACCA GCGCATGCCA GGAGCGGGGA CTCGAGCTGC CGCGGTTGAT GTGCGAACCG GGTCGCTCCC TGGTGGCGAC CGCTGGCGTG ACCCTGTATT CGGTGGGCTC ACGCAAAACA ATCCCGAACG TGCGCACCTA CGTGGCCATC GACGGCGGTA TGAGCGACAA CCCTCGCCCG ATCACCTACC AGTCGCTCTA CACCTGCTGC CTGGCCGATC GCCCCCTGGC CAAGCCAGAC GAAAGCGTGA ACCTGGTGGG CAAGCACTGC GAATCCGGCG ATGTGCTGCT AAAAGACCTC TCCCTGCCCA CCACCGAGAG CGGTGACATC GTCGCCGTGT TCGCAACCGG TGCTTACAAC GCCTCTATGA GTTCGAACTA CAACCGGATT CCGAGGCCCG CTGCCGTTCT GGTGCACGAC GGGTCAGCCG AACTGGTGCA AAAGCGGGAG CAGCCGGATG ACCTGCTGCG CTACGACGTT TTGCCAGAAC GATTCAACGC GTTACGTTGA
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Protein sequence | MTQTITSQRP FEANRDAESP NRNLTPITTE LDGTDRLVVG GCRLSDLAER YCTPLYVLDE ATVRATCRAY REALNKHYAG PSLPIYASKA NSSLVMSSLA ASEGLGLDAV SAGELLTALR GGMPGDRMVL HGNNKSDEEL LLAYANKVTI VVDNQHDLDR LAELVPAGSE PARLMLRFTP GIECHTHEYI RTGHLDSKFG FDPDQVEPVL RSLVGQPWAQ LTGLHAHIGS QIFELEPHRD LAAVMADKLK LARDLGHPVT DLNVGGGLGI RYVESDDPPS IEQWIKVVAE AVTSACQERG LELPRLMCEP GRSLVATAGV TLYSVGSRKT IPNVRTYVAI DGGMSDNPRP ITYQSLYTCC LADRPLAKPD ESVNLVGKHC ESGDVLLKDL SLPTTESGDI VAVFATGAYN ASMSSNYNRI PRPAAVLVHD GSAELVQKRE QPDDLLRYDV LPERFNALR
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