| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1590 |
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| Symbol | |
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| ID | 3736695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1460643 |
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| End bp | 1461680 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637776178 |
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| Product | chlorophyll a/b binding light harvesting protein PcbD |
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| Protein accession | YP_381894 |
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| Protein GI | 78213115 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03041] chlorophyll a/b binding light-harvesting protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.10047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00277314 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTCTT ACGGAAGTTC ATCAGTCACT TATGACTGGT GGGCTGGAAA TGCAGGAGTC
GCGAAGCGCA GCGGTTCTTT CATTGCAGCC CACGCTGCCC ATGCAGGTTT AATCATGTTT
TGGGCAGGTG CATTCACCTT GTTTGAGTTG GCCCGTTATG ACGGAACACT GCCAATGGGA
GAACAAGGGC TGATTTTGAT TCCACATCTC GCCGGCCTTG GCTTCGGCGT AGGGGAAAGC
TCTGTAATCG TTGACCAACA ACCCCTCATC GCGATCGCAG CATTCCATCT GGTTTCGTCT
GCTGTTCTTG GAGCAGCTGG AATCTGGCAT ACACTTCGAG CTCCCAGGGA CCTTTCAGAG
GCTGAAGGCC GCGCCCAAAA GTTTCATTTT GAATGGAGTG ATGACAAAAA GCTCACGTTC
ATCCTGGGGC ATCACCTGAT TTTTCTCGGC CTGGGTGCCA TTGCCTTCGT TGAATGGGCA
AAACGACATG GAATTTACGA CAGCGCCATC GGAGCTGTTC GACGGGTTGA ACCAAATATT
GACCTCGGTA TGGTGTGGAG TTATCAGGCT AATTTTCTTT CCATCAGCAG TCTTGAAGAC
GTGGTGGGTG GCCATGCTGT TTTGGCCTTC ATTCTCACGA TTGGTGGTGT TTGGCATATC
ATCTCTAGGC CTTTCGGACC CTTCAAAAAG GTCTTGATCT ACAACGGCGA ATCGATCCTG
TCTTACTCGC TTGCCAGTGT AGCTCTGATG GGATTTGTGA CCGCCATTTG GTGTGCTCAA
AACACAACAA TTTACCCCGT TGAGTTGTAT GGCGATCCGT TGAAATTGAA TTTCGCTTTC
TCTCCCTATT TCAGCGACGC AACTGCTCTT GAGGGTGGTG CCCACTCAGC CCGAGCTTGG
CTGGCCAATA CGCACTTTTA CCTTGCATTC TTTTTCCTGC AAGGACATTT TTGGCATGCC
TTGCGCGGCA TGGGCTTTAA CTTTAAGCGC GTTTCTGAGG CGCTTGACAA CATGGGAAAT
TCCAAGGTCA GTGCCTGA
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| Protein sequence | MQSYGSSSVT YDWWAGNAGV AKRSGSFIAA HAAHAGLIMF WAGAFTLFEL ARYDGTLPMG
EQGLILIPHL AGLGFGVGES SVIVDQQPLI AIAAFHLVSS AVLGAAGIWH TLRAPRDLSE
AEGRAQKFHF EWSDDKKLTF ILGHHLIFLG LGAIAFVEWA KRHGIYDSAI GAVRRVEPNI
DLGMVWSYQA NFLSISSLED VVGGHAVLAF ILTIGGVWHI ISRPFGPFKK VLIYNGESIL
SYSLASVALM GFVTAIWCAQ NTTIYPVELY GDPLKLNFAF SPYFSDATAL EGGAHSARAW
LANTHFYLAF FFLQGHFWHA LRGMGFNFKR VSEALDNMGN SKVSA
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