Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1577 |
Symbol | |
ID | 3736874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1447878 |
End bp | 1448546 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637776165 |
Product | putative hydroxylase |
Protein accession | YP_381881 |
Protein GI | 78213102 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.572766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0227046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCC TGACGCATTC TCTTTTGCCT CTTCATGAAG TTTGTGCCCT TCAGCAGCGC CTCAGTGCTC CCAACCTTCC CTGGCGAGAT GGCCGATTGA CTGCAGGGGA CCAGGCTGCA TTGGTGAAGA AAAACTACCA GCTCGATCCG AATGCTGAGC TTTCACTTGC GATTAGCAAT TGCATTTCTA CAGCATTAAC GAGTGACCCT CTTGTTAAAA GTTTTTCACT TGTTCGTAAG GTCCATAGTT TGTTGGTTTC TAGATCAAGT GCTGGAGAAT CTTATGGATG GCATGTTGAT AATCCTTTCT CCCGCAATGG TCGTCGGGAT TTGTCTTTCA CCTGCTTTCT CAGTGATGAA GATTCCTATG AGGGCGGATC CTTAATGATC CAAACTGGTG GTGAGGACAC GAAGGAATTT CGCTTGCCAC CTGGCCAAGT TGTTCTCTAT CCGTCATCCA CGCTTCATTG TGTTACACCG GTTTTGAGCG GTGATCGTTA TGTATGTGTC GGCTGGATTG AGAGTTATGT CAAGGCAGCT GACGACCGCT CAATGTTATT CAATATCGAT GCTGGTGCAC GGGGTTTGTT AGCTCGCCAT GGACGATCGG ATGAACTTGA TCTGATCTTT CAAAGCTATA CGAACGCTGT CCGACGCTTG TCGAGTTGA
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Protein sequence | MEFLTHSLLP LHEVCALQQR LSAPNLPWRD GRLTAGDQAA LVKKNYQLDP NAELSLAISN CISTALTSDP LVKSFSLVRK VHSLLVSRSS AGESYGWHVD NPFSRNGRRD LSFTCFLSDE DSYEGGSLMI QTGGEDTKEF RLPPGQVVLY PSSTLHCVTP VLSGDRYVCV GWIESYVKAA DDRSMLFNID AGARGLLARH GRSDELDLIF QSYTNAVRRL SS
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