| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1485 |
|---|
| Symbol | |
|---|
| ID | 3736421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1383918 |
|---|
| End bp | 1384742 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637776074 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_381790 |
|---|
| Protein GI | 78213011 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.122101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.297655 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTT TGCTGGAACC CCTCAGTCAC GCCTTCATGG TGAAGGCTTT GATGATCAGT
GCCCTGGTTG GGGGTGTTTG CGGGCTGTTG TCCTGCTTCA TGACCCTGAA GGGATGGGCG
TTGATGGGTG ATGCCGTCTC CCATGCTGTA CTCCCTGGCG TGGTGGTGGC CTATGCCCTG
GGCCTGCCCT TCTCCCTCGG GGCGTTCGTC TTCGGTGTGG GCTCCGTTGC CGCCATCGGC
TTTGTGAAGC AGAAGTCGAG GGTGAAGGAA GACACCGTCA TCGGGCTTGT CTTCACTGGC
TTCTTCGCTC TGGGGCTCGT GCTCGTCTCC AAGACGCGCA GCAACATCGA TCTCACCCAC
ATCCTGTTCG GCAATGTTCT GGGGATCTCA GCGGGGGACG TGCAGCAGAC CCTGGTGATT
TCGGTGCTGG TGTTGGTGCT GCTGCTGCTG TTTCGGCGGG ACCTGATGCT CTTCTGCTTC
GATCCGACCC ACGCCAGATC GATCGGGATC AACACCGGAC TCCTGCACTA CATGCTGTTG
GGACTCCTGT CCCTGGCCGC CGTTGCCGGC CTGCAGACCG TGGGAATCAT CCTGGTGGTA
TCCATGCTGG TCACCCCCGG TGCCACGGCC TATCTGCTCA CCGATCGGTT TGACCGGATG
ACGCTGCTGG CCGTCACCAG CAGCGTGCTC TCCAGCGTTC TGGGGGTGTT CATCAGCTAC
TGGACCGACA GCTCCACCGC TGGTTGCATC GTGCTGGCAC AAACCGCGCA ATTCGTGCTC
GCCTTTCTTC TTGCTCCTGG CCAGGGGGTG CTGCGGCGTC TCTGA
|
|---|
| Protein sequence | MELLLEPLSH AFMVKALMIS ALVGGVCGLL SCFMTLKGWA LMGDAVSHAV LPGVVVAYAL
GLPFSLGAFV FGVGSVAAIG FVKQKSRVKE DTVIGLVFTG FFALGLVLVS KTRSNIDLTH
ILFGNVLGIS AGDVQQTLVI SVLVLVLLLL FRRDLMLFCF DPTHARSIGI NTGLLHYMLL
GLLSLAAVAG LQTVGIILVV SMLVTPGATA YLLTDRFDRM TLLAVTSSVL SSVLGVFISY
WTDSSTAGCI VLAQTAQFVL AFLLAPGQGV LRRL
|
|---|
| |