| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1438 |
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| Symbol | |
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| ID | 3736030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1350221 |
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| End bp | 1352140 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637776031 |
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| Product | FtsH peptidase |
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| Protein accession | YP_381747 |
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| Protein GI | 78212968 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.226378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.078862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGC GCTGGCGCCT TCTTGCCCTC TGGCTGTTGC CAATCGGCGT CGTGTTGCTG
ATCGGCTGGC AGGTCGTGAG CAATGGAGGC ATGAATGGCC TCAGCCAAGA CAGCAATGGC
ACCACAGTCG CTCCTCGCAA TGCTGCGGTG GCACGGATGA GCTACGGCCG CTTCCTCGAT
TACGTCGAGG CCGGTCGCGT CACAGCCGTT GACATCTACG ACGGTGGCCG CAACGCCGTG
ATCGAAGCCG TTGACCCCGA CCTCGACAAC CGCGTCCAGC GCCTTCGCGT TGATCTTCCT
GGTCTGGCAC CTGAGCTGAT CAACACGCTG AAGACCGAAG GCATCAGCTT TGACATTCAT
CCCCCCCGCA CAGCTCCACC GGCGCTCGGA GTTTTGGGCA ATCTGGCGTT CCCGCTGCTG
CTGATCGGTG CCCTGATCTT CCTGGCCCGC CGCAACAGCA ACATGCCTGG CGGCCCTGGC
CAAGCCATGC AGTTCGGCAA AAGCAAAGCC CGCTTCATGA TGGAAGCGGA GACCGGAGTC
ATGTTCGATG ACGTGGCCGG CGTCACCGAG GCCAAGCAGG AACTACAAGA AGTGGTCACC
TTCCTGAAGC AGCCCGAGAG GTTCACTTCC GTGGGTGCTC AGATTCCCCG TGGCCTTCTG
CTGGTCGGCC CTCCCGGCAC AGGCAAAACC CTGCTCGCCA AGGCCATTGC CGGTGAAGCG
GGAGTTCCCT TCTTCTCCCT CTCTGGTTCG GAGTTCGTTG AGATGTTCGT TGGCGTGGGT
GCCAGCCGCG TCCGCGATCT GTTCAAAAAG GCCAAAGAAA ACAGCCCCTG TTTGATCTTC
ATCGACGAAA TTGATGCCGT TGGCCGCCAG CGCGGCGCCG GCATCGGTGG AGGAAATGAC
GAACGTGAAC AGACTCTCAA CCAGCTCCTG ACGGAGATGG ATGGCTTCGA GGGCAACAGC
GGCATCATCA TCATCGCCGC CACCAACCGC CCCGATGTTC TGGACTCAGC TTTGATGCGT
CCCGGCCGTT TCGACCGTCA GGTCACCGTG GACGCCCCCG ACATTAAGGG TCGTCTCGCC
ATCCTGGACG TCCATTGCCG CAACAAGAAG CTCGAAGAAG AGCTGTCCCT CGAGAGCATC
GCCCGCCGCA CCCCTGGCTT CACTGGTGCT GACCTGGCCA ACCTGATGAA TGAGGCGGCC
ATCCTCACCG CACGGCGCCG CAAGGAAGCC ATCGGCTTGA GCGAGATCGA CGACGCTGTC
GATCGGATCA TTGCTGGCAT GGAGGGTCGT CCCCTCACCG ACGGTCGCAG CAAGCGACTG
ATCGCATACC ACGAGGTGGG CCATGCCCTG ATCGGGACGC TGGTTAAAGA CCACGACCCT
GTTCAGAAAG TCACTTTGGT TCCCCGTGGT CAGGCCCAGG GTCTTACCTG GTTCTCCCCG
GACGAGGAGC AAACCCTCGT CACCCGCGCC CAGCTCAAGG CACGCATAAT GGGAGCCCTT
GGTGGCCGCG CCGCTGAAGA TGTGGTGTTC GGCCACCAGG AAGTGACCAC CGGAGCCGGT
GGCGACATCC AGCAGGTTGC TTCCATGGCC CGCAATATGG TGACCCGACT CGGCATGAGT
GATCTCGGCC CTGTTGCCCT CGAAGGCGGC AGCCAGGAAG TGTTCCTGGG CCGCGATTTG
ATGTCACGCA GTGATGTGTC GGAATCGATC TCCCAGCAGA TCGATATTCA AGTGCGCAAC
ATGGTGAAGC GCTGTTATGA CGAAACCGTG GAAATCGTGG CTGCCAACCG CGAAGCCATT
GATCGTCTAG TGGAACTGCT GATCGAGAAG GAAACCATGG ATGGTGATGA GTTCAAGGCC
GTTGTGGCTG AATTCACCGC TGTTCCTGAG AAAGACCGCA CCGTCGTCAC CCTGGATTGA
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| Protein sequence | MNQRWRLLAL WLLPIGVVLL IGWQVVSNGG MNGLSQDSNG TTVAPRNAAV ARMSYGRFLD
YVEAGRVTAV DIYDGGRNAV IEAVDPDLDN RVQRLRVDLP GLAPELINTL KTEGISFDIH
PPRTAPPALG VLGNLAFPLL LIGALIFLAR RNSNMPGGPG QAMQFGKSKA RFMMEAETGV
MFDDVAGVTE AKQELQEVVT FLKQPERFTS VGAQIPRGLL LVGPPGTGKT LLAKAIAGEA
GVPFFSLSGS EFVEMFVGVG ASRVRDLFKK AKENSPCLIF IDEIDAVGRQ RGAGIGGGND
EREQTLNQLL TEMDGFEGNS GIIIIAATNR PDVLDSALMR PGRFDRQVTV DAPDIKGRLA
ILDVHCRNKK LEEELSLESI ARRTPGFTGA DLANLMNEAA ILTARRRKEA IGLSEIDDAV
DRIIAGMEGR PLTDGRSKRL IAYHEVGHAL IGTLVKDHDP VQKVTLVPRG QAQGLTWFSP
DEEQTLVTRA QLKARIMGAL GGRAAEDVVF GHQEVTTGAG GDIQQVASMA RNMVTRLGMS
DLGPVALEGG SQEVFLGRDL MSRSDVSESI SQQIDIQVRN MVKRCYDETV EIVAANREAI
DRLVELLIEK ETMDGDEFKA VVAEFTAVPE KDRTVVTLD
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