Gene Syncc9605_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1376 
Symbol 
ID3735931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1292186 
End bp1292695 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content43% 
IMG OID637775968 
Producthypothetical protein 
Protein accessionYP_381685 
Protein GI78212906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000443155 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.15174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCCCA GCTGGATCGG AGATGGTGTG TTCACGGGCG AGAGCCTCGC AACACAAAGG 
AATCAAATGA AACTCTTCAA GACAATCGCT GTTGCTATGG CAGCAATAGG CATCGGAGCA
GTAGTCGCTG GCTGTGGTCC TTCCAAGCCC AGACAGGCTG ACCTACCAAA GCAAGCAGAT
AAGTGGGTTA GCAAGGTGAA AGTTGATCCA GAGAGCAAAG TTACATACAT AGGAAAAACA
AGAAATTTTC TAATTACTGA TGCAAGCCAG GTCAAGGAGC TGAATGACAG TCGACCCATA
AAAATTGGCG ACACCATTAA TGGAATAAAA ATTGGAGCGA TTAAGTGCAG CTTCCATTGG
AATGACTCAA GCTATGGCAA CAGCCAATTT ATGTGGCGAG GCAAATGTGG ATGCATGGCT
GGAAGAAACA AATATCAAAT AAATAATGCT GTAAACAATG ATGGCAAAAA GAATTTTGAC
TATATAAACG TAGCTCCGGT CTCTCTTTAG
 
Protein sequence
MIPSWIGDGV FTGESLATQR NQMKLFKTIA VAMAAIGIGA VVAGCGPSKP RQADLPKQAD 
KWVSKVKVDP ESKVTYIGKT RNFLITDASQ VKELNDSRPI KIGDTINGIK IGAIKCSFHW
NDSSYGNSQF MWRGKCGCMA GRNKYQINNA VNNDGKKNFD YINVAPVSL