| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1326 |
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| Symbol | |
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| ID | 3736089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1240856 |
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| End bp | 1241905 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637775918 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_381635 |
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| Protein GI | 78212856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0931152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAC CGCTTGCTCT GGCAGCTGCT GTAAGCCCTG TGCTGTCCTT GGGTTTGTGG
GCTTCTCTGC CCGGAATTGC CGATAACGCC ACCTTTGAGC TTGCTGAGTT GCCTCCGCTG
CCAGCTCTTG ATCCTCCGGT AATCAACGCT GTTGTAAGCA AAGCCGAACC AACAAATCCG
GTTTGGTTCG AGGTTGTTCG CGAAACGTCG CTGAGGCGTT TTGCTGAACT GTTCAAACTT
GATCGTGAGG CTCTGGCCGC GTTGAACAAC GTGCCTTCCT CCCACGTTTT CGCGAAAGAG
AGTTGGCTTT CCCTGCCTCG TTCTGCCCGG GTTGTTGCTG GGACGTTGTC GTCACTCAAG
CGGAACAGTG AGCGTCAGAC GCTTCCAGTG GCCGCCCCGC CACCGGTCGG CACCCTTGCG
AAAATCCAGA AAGGTGATTC CCTGGCTGCC TTCCTCAAGC GCCACGGCGT CACCCAAGAG
CAGCTCAAGA CCTGGAATCC AGGGCTTGAA CTCAGTGCTC TGACGGTTGG TCGGGAACTT
CAAGTCGCCC AGGCTTCTTC CGGCCAGTCC CTGCTTGCTG TTCGTCCGCT CCGAAGTGGA
GGTGCTGCTT GGCCAGAGCA CACGCTTCTC CCGATGGCGG ATCAACCCGA CAGCCTCAAA
CCACCGATCG TGGGTTATCA ATGGCCAACA AAGGGTGTTT TTACCTCTGG TTATGGATGG
CGTTGGGGTC GGATGCACAA AGGGATTGAT ATCGCCAACA ACACCGGAAC ACCTGTCGTT
GCAGCACGAG ATGGGATTGT CTCCTATTCC GGCTGGAGCG GTGCCTACGG ATACCTGGTT
GAAATTGCTC ACAGTGATGG TGAATCCACG CGTTATGCCC ACAACAGCCG CCTTCTGGTC
AAAAAAGGAC AAGTTGTTCC TCGCGGGGCT CGCATTTCAC TGATGGGAAG CACCGGACGT
AGCACCGGAC CTCACCTTCA CTTCGAAATC CGTCGAGCCG GTGGCGCAGC ACTCAATCCC
TTGGTCAAGC TGCCGGCACG AAAGGCCTGA
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| Protein sequence | MRAPLALAAA VSPVLSLGLW ASLPGIADNA TFELAELPPL PALDPPVINA VVSKAEPTNP
VWFEVVRETS LRRFAELFKL DREALAALNN VPSSHVFAKE SWLSLPRSAR VVAGTLSSLK
RNSERQTLPV AAPPPVGTLA KIQKGDSLAA FLKRHGVTQE QLKTWNPGLE LSALTVGREL
QVAQASSGQS LLAVRPLRSG GAAWPEHTLL PMADQPDSLK PPIVGYQWPT KGVFTSGYGW
RWGRMHKGID IANNTGTPVV AARDGIVSYS GWSGAYGYLV EIAHSDGEST RYAHNSRLLV
KKGQVVPRGA RISLMGSTGR STGPHLHFEI RRAGGAALNP LVKLPARKA
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