Gene Syncc9605_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1294 
Symbol 
ID3737237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1206501 
End bp1207424 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content61% 
IMG OID637775884 
Productphosphonate-binding periplasmic protein 
Protein accessionYP_381603 
Protein GI78212824 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.600293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAC GAGAACGCAG GGCCGTGGTA GCCACCGGTT TGATTGCCGG CCTCGCACTC 
ACGGCCAGTG TTTCCAGTTG CGGCGCACCC CAGAACGACA CCAAACAGGC CGTTCTGCAG
ATCGGTGCCA TCCCCGACCA GAACCCCGAG AAACTGAATC GCCTCTACGG CACGCTCTCT
TCGGAACTCA GCGAAAAGCT GGATGTGCCT GTGCGGTATG CGCCGGTGAG CAATTACGCG
GCGGCGGTGA GTGCCTTCCG CACCGGCAGC CTTGATCTGG TCTGGTTCGG TGGACTCACC
GGTGTGCAGG CCAGGCTGCA GACGCCTGGA GCCCGGGTTC TGGCGCAACG GGAGATCGAT
GCAGAGTTCA CAAGTGTGTT CATCGCCAAT GGCGCCAGTG GTTTGCGCCC CATCACCAGT
GGCGACCAAC TGGTTGAACT GAAGGGACGC CGACTGGCCT TCGGTTCGGA GAGTTCTACC
TCCGGCCGCC TGATGCCCCA GTTTTTCATG GGGGAGAACG GCGTGAAACC TGAGGATCTG
GCGGGGGGCG GACCTGGCTT CAGCGGAAGC CACGACGCCA CCATTGCTGT GGTGCAAAGC
GGTGCCTACG AGGTGGGCGC CTTGAACGAG CAGGTCTGGC GCAGCAATAT GGCGGACGGC
CGCGTGGATC CAAGCAAGGT GTCGGTGATC TGGAGGACAC CGCCCTACGT GGATTACCAC
TGGGTGGTGA GGCCTGGGCT GGATGAGCGC TTTGGCGATG GTTTCACCGA CAAGCTCCAA
ACCGCCTTGC TGGACCTTTC GGCAGACACA GAGAACGGCG CCACTATTCT TGAGCTGTTT
GGTGCCGAAC GCTTCATCCC CGCCAAGGAC GAGGACTACG TGATGATAGA AACGGTGGGT
CGCCAACTCG GAAAGATCCG TTGA
 
Protein sequence
MSVRERRAVV ATGLIAGLAL TASVSSCGAP QNDTKQAVLQ IGAIPDQNPE KLNRLYGTLS 
SELSEKLDVP VRYAPVSNYA AAVSAFRTGS LDLVWFGGLT GVQARLQTPG ARVLAQREID
AEFTSVFIAN GASGLRPITS GDQLVELKGR RLAFGSESST SGRLMPQFFM GENGVKPEDL
AGGGPGFSGS HDATIAVVQS GAYEVGALNE QVWRSNMADG RVDPSKVSVI WRTPPYVDYH
WVVRPGLDER FGDGFTDKLQ TALLDLSADT ENGATILELF GAERFIPAKD EDYVMIETVG
RQLGKIR