Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1242 |
Symbol | |
ID | 3735835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1162170 |
End bp | 1164701 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637775832 |
Product | putative peptidase U32 family protein |
Protein accession | YP_381552 |
Protein GI | 78212773 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.648851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGTCC CCGAACTGCT ATCGCCCGCC GGCGACTGGG CTGCGATGAA GGCGGCTGCT GCCTCCGGTG CTGATGCGGT CTATTTCGGT GTTGATGCCT TCAACGCCCG CCAGCGGGCT GAAAACTTCC GACTGCAAGA CCTTTCCGAG GTGATGCAAT GGCTGCATCA GCGGGGGGTG AAGGGATTCC TCACCTTCAA CGTGTTGGTG TTCAGCGATG AATTGGAGGC AGCAGCTCAG TTGCTGATCG CTGCAGATCG AGCCGGCGCT GATGCGGTGA TCGTCCAGGA CGTGGGTCTC TGTCGCCTGG CCCAGCGGCT GGTGCCGAAT CTCTGTGTGC ACGGCTCAAC CCAGATGTCG ATCACCAGTG CAGCGGGCAT CGCCCAGGCT GCTGCACTCG GTTGTCAGCG GGTGGTGCTC GCCCGGGAGC TGGCTTTGCG TGATCTTGAG CGCCTGCAGA CACAACTGGT CCAGCGGAAC CTTGCGATGC CGTTGGAGGT GTTCGTGCAC GGCGCCCTTT GCGTTGCCTA TTCCGGTCAA TGCCTGACTA GTGAATCGCT TGGGCAGCGC AGTGCCAATC GAGGTGAGTG TGCCCAGGCC TGTCGCCTGC CCTACGAACT GGTGGTGGAT GGTCAACCTC ACCTGCTTGA TGACCAGCGA TACCTCCTCT CGCCCCAGGA TCTGGCGGCC TGGGAGCTGC TGCCGGAGTT GCAGCGCATC GGCGTGGCCA GCCTCAAGAT CGAAGGCCGC CTGAAGGATG CTGCCTACGT GGCTGCCGTC ACCGACGCCT ATCGGCAGCG CCTGGATCAG ACCTCCGCTG CGGCGCCGCA GGTGCATCGC CAACTTGAGC TGGCATTTTC CCGAGGCCTG TCCACCGGTT GGCTGGAAGG GGTGAACCAT CGCCGTCTGG TGCATGGCCG CTGGAGCAAG AAACGGGGCC CCCTAGTGGG GCAGTTGCTG CGGGTGGAAC GGGGTGGTTG GTTGCATCTG CGCAGCCGGG ACCAGCTGCA ACCTGGTCAG GGCCTTGTGC TGGAACAGCT GTCGTCCGAC CCCCTGCAGC CGCCTCGGGA GATCGGTGGC CGGATCATGG TGTGTGAGCG GCTGGGCGAC GAGCGCTGGA AGCTGCGCCT TGGGCCCGAG CGAGTGGATA GCTCAGGCTT GAGACCTGGC ACCTCGGTCT GGCTCACCAG TGACCCTGAC TGGCAGTCCC GTTGGCAGCG TGCTGCCCGC CGCACGGTGG AGGCCCGGTC TCGGGATCTT TCGCTGCGGG TGTCCGGTCG GCTCGATGCA CCGCTGGAGT TGCACCTGCT GGCGCCCCCG GGGCTGGATC TGCAGGTCAG CAGCTCCATG CCGCTGCAGA GCGCTTCGCA GCGCCCCTTG GATCTGGATC GCCTAGAGCA GCAACTTGGA CGCCTGGGGG GAACCGGCTG GTTGCTCCAG CGTCTTGAGG TCCAGCTGGA GGGCGATCTC TTTCTGCCGG TGGCGGAATT AAACCGCATG CGCAGGGTGC TGCTGGAGCG GTTGGAGGCC TCGTTGGATG GGAACAGTGA TTCAGGTCCT GTCCCTGGAG ACACCAAAAC GGCAGACCCG ACAGAGCTGC TGGCTCAGAT GTGCCCACCA GTTGTCGCTC CCCTCAGCGA GACCAAGCCA GGCCTGGTGG TGCTGGTGCG CAGCCTGGAG CAGCTGCAGG CCTTGGTCGA TCTCTCCGGC ACGGACCTGC CGATTCGCTC GGTGGTGGCG GATCTCGAAC AGCCGCGGGA GCTGCGGGAA GCGGTGGCGA TCGGTCGAGG CTGCTGGCCG GAGGGTGTTT GGTTGGCCGG GGCACGGATC ACACGGCCTG ATGAACGCTG GACGCTTGAG CCACTGATTC GTGCTCGCCC CGACGGTTTC CTGGTGCGAA ATGCCGATCA GCTGGAGGTG CTGACTCCTC TGGCCCCTTG CATTGGTGAC TTTTCCCTCA ACACCGCCAA CCCCCTGAGC CTCCACTGGT ATCGCGACCA CTGGAAGCTG CAGCGACTCA CGGCCAGTTA CGACCTGAAC CTTCAGCAAC TGCTGGGTCT GGCCGTCGCC GTTGATCCGG CGCTACTGGA GGTCACCCTT CATCAGCACA TGCCGTTGTT CCACATGGAG CATTGCCTGT TCTGTGCGTT CCTCTCAAAC GGCAAGGACC ACACCGATTG CGGTCGTCCC TGTGAGAAGC ACCACGTCAC CCTGCGAGAT CGCAGTGGCG TTGAACATCC CCTGCGGGCT GATCTGGGGT GTCGCAACAC CCTTTTCAAT GGCACGGCGC AATCGGGCGT GGAGGCGCTT CCGTCTTTGT TGCGGGCGGG TGTGCGCCGG GTTCGGCTTG AACTTCTTGA TGAGGATGCC GCTGCAACGC GCCGGCGCGT CAGCTTGTAC GCCGAGGCTT TGGCGGGCCG GATGGCCACC CAGGAGGTCT GGTCCCAAGA GCAGATCCAC CACCAGCTGG GCGTCACCCG CGGCAGTCTG CGCAGCAAGG GTCCGGAGCG CACCAGTCGA TTCTCACGTT GA
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Protein sequence | MNVPELLSPA GDWAAMKAAA ASGADAVYFG VDAFNARQRA ENFRLQDLSE VMQWLHQRGV KGFLTFNVLV FSDELEAAAQ LLIAADRAGA DAVIVQDVGL CRLAQRLVPN LCVHGSTQMS ITSAAGIAQA AALGCQRVVL ARELALRDLE RLQTQLVQRN LAMPLEVFVH GALCVAYSGQ CLTSESLGQR SANRGECAQA CRLPYELVVD GQPHLLDDQR YLLSPQDLAA WELLPELQRI GVASLKIEGR LKDAAYVAAV TDAYRQRLDQ TSAAAPQVHR QLELAFSRGL STGWLEGVNH RRLVHGRWSK KRGPLVGQLL RVERGGWLHL RSRDQLQPGQ GLVLEQLSSD PLQPPREIGG RIMVCERLGD ERWKLRLGPE RVDSSGLRPG TSVWLTSDPD WQSRWQRAAR RTVEARSRDL SLRVSGRLDA PLELHLLAPP GLDLQVSSSM PLQSASQRPL DLDRLEQQLG RLGGTGWLLQ RLEVQLEGDL FLPVAELNRM RRVLLERLEA SLDGNSDSGP VPGDTKTADP TELLAQMCPP VVAPLSETKP GLVVLVRSLE QLQALVDLSG TDLPIRSVVA DLEQPRELRE AVAIGRGCWP EGVWLAGARI TRPDERWTLE PLIRARPDGF LVRNADQLEV LTPLAPCIGD FSLNTANPLS LHWYRDHWKL QRLTASYDLN LQQLLGLAVA VDPALLEVTL HQHMPLFHME HCLFCAFLSN GKDHTDCGRP CEKHHVTLRD RSGVEHPLRA DLGCRNTLFN GTAQSGVEAL PSLLRAGVRR VRLELLDEDA AATRRRVSLY AEALAGRMAT QEVWSQEQIH HQLGVTRGSL RSKGPERTSR FSR
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