Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1218 |
Symbol | |
ID | 3737009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1137488 |
End bp | 1138657 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637775808 |
Product | DevC protein |
Protein accession | YP_381528 |
Protein GI | 78212749 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.188524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.730906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGT TCTGGCGGGG CCGTCGGATT CCCCTCTCCT GGCTTTTGCT GACGCGCCAG CCCGTGCGGT TGCTGGTGGC ACTCGCCGGC ATCAGCTTCG CGGGAATCCT GATGTTCATG CAGCTCGGCT TCCGTGATGG CCTTTTTGAT GCCAGCGTCA CGGCGCACCG TCTGTTCGAT GCCGATGTCG TTCTGATCAG TCCCCGCTCC GCCAGCTCCG TGAGCATGGA AGCCTTTCCA AGGCGGAGGC TGGTTCAGAC CCTGGCTGAT CCATCCGTCG ATGGGGTGAC CCCGGTGCAC TGGGGGCTGA TGCTCTGGCG GAACCCTGAA ACGCGTCGCA ACCGGTCGAT CCTCGCCTTG GGCTTCAATC CCGACGATCC CTTCTTCGTC GACCCCTCCC TGGCTGAAAA ATCTGACGCT CTCAAGCAGA AAGGGCGGAT CCTGTTCGAT CAGCTGTCAC GCCCTGAATT CGGACCCATT GCCGATTGGT ATCGCGATGG CCGAGTGGTG GAGACCGAGA TCGCTGGCAA CCGCGTCCGG GTGGCGGGTC TGGTGAGCCT GGGCACCAGC TTCGGTGCCG ACGGCAATCT GCTCACGAGC ACCGAGACGT TTCTCGATCT GATGCCTCAG AAGCCGCCTG GGGCGATCGA AGTGGGTCTA GTGCGGTTAA AGCCAGGAGC GGATCCTGAG CAGGTGGTGT CCCGATTAAG CCAGCGGCTG CCCAAAGATG TTTCGGTGCT GACCAAGCAG GGCTTCATCG ATTTCGAGCA GAACTACTGG AAAAGCAGCA CCTCCATCGG TTTCATCTTC AGCCTGGGTG CTGCCATGGG CTTCGTGGTG GGCTGCGTGA TCGTGTACCA GGTGCTCTAC ACCGATGTAA GTGATCACCT GCCGGAGTAC GCCACCTTAA TGGCCATGGG CTATCGCCTC AGCCACCTCT TGGGAGTGGT GGTTCGTGAG GGCTTCTATT TGGCGGCGAT GGGCTACGTC CCCGCCTACC TGGCTGGTCA GGGGTTGTAC TGGTTCGTTC GTGACGCCAC CAAGCTGCCC GTCGGCATGG ATCTGTCCCG GGCGTTGACC GTTCTGGTGA TGATCCTGGT GATGTGCATG TTGTCGTCGT TCCTGGCCAT GCGTCGTCTC ATTGATGCAG ACCCTGCGGA GATCTTCTGA
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Protein sequence | MNRFWRGRRI PLSWLLLTRQ PVRLLVALAG ISFAGILMFM QLGFRDGLFD ASVTAHRLFD ADVVLISPRS ASSVSMEAFP RRRLVQTLAD PSVDGVTPVH WGLMLWRNPE TRRNRSILAL GFNPDDPFFV DPSLAEKSDA LKQKGRILFD QLSRPEFGPI ADWYRDGRVV ETEIAGNRVR VAGLVSLGTS FGADGNLLTS TETFLDLMPQ KPPGAIEVGL VRLKPGADPE QVVSRLSQRL PKDVSVLTKQ GFIDFEQNYW KSSTSIGFIF SLGAAMGFVV GCVIVYQVLY TDVSDHLPEY ATLMAMGYRL SHLLGVVVRE GFYLAAMGYV PAYLAGQGLY WFVRDATKLP VGMDLSRALT VLVMILVMCM LSSFLAMRRL IDADPAEIF
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