Gene Syncc9605_1175 details

Gene Information

• Locus tag: Syncc9605_1175
• Symbol: dnaG
• ID: 3736914
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9605
• Kingdom: Bacteria
• Replicon accession: NC_007516
• Strand: +
• Start bp: 1103219
• End bp: 1105267
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637775765
• Product: DNA primase
• Protein accession: YP_381485
• Protein GI: 78212706
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00198747
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTGAACG CTCGCCTGCA CCCAAGAACG ATCGAGGCCG TTAAGGAACG GGCCGACATC 
GTTGATGTGG TGGGCGAGCA CGTGGTGCTC AAGAAGAAGG GACGGGAATT CGTCGGGATC 
TGTCCGTTCC ATGACGACAG CAAACCGTCG ATGACGGTGT CTCCTGCCAA GCAGTTCTAC 
TACTGCTTCT CCTGTGGTGC TGGCGGCAAC TCCATCAAGT TCCTGATGGA GTTTCAGCGC 
CAGAGTTTCA GCGATGTTGT GCTGGATCTG GCCCGGCGTT ATCAGCTGCC GATCGAGACG 
GTGGATGGTC CGCAGCAGGA ACGGCTGCGG CAACAGTTGT CCCGCAGGGA CAAGCTGCAG 
CGTGCCCTGG CGCTGGCTGC CGGTTGGTTT CGCAGCCAGT TGATGGCGCC TGCTGGTGCA 
GAGGCCCTCA AGTACCTCAG TGAGGCCCGA GAGTTGAGTC CCGCCACCCA GGAAACCTTC 
CAACTCGGCT ATGCGCCGGA TCAGTGGGAT GGTCTGCTCA AGCATCTTCA ACAAGTTGAG 
GGGCTGGCGC CTGAGCTTCT CGAGGCTGCT GGTCTGGTGG TTCCCCGCAA AGGCGGCAAC 
GGGTTCTATG ACCGCTTCCG CCATCGGGTC ATGGTGCCGA TCCATGACCG TCAGGGCCGG 
GTGATCGGTT TCGGGGGACG CAGCCTTGAT GGCAGCGAAC CGAAATACCT CAACTCCCCC 
GAGACCGAAG TGTTCGAGAA GGGGAAGCAT CTGTTCGGTC TCGACAAGGC CTCCAATGCC 
ATCCGCAAGG ACGACAGGGC AGTGGTGGTG GAGGGCTATT TCGATGTAAT TGCCCTGCAT 
GCCGCCGGTA TTACCAACGC TGTGGCCTCC CTCGGCACGG CCCTGAGCAG TCAGCAGATC 
ACCCAGTTGT GCCGCGTTAG CGACAGCAAG CGGATCGTTC TGAATTTCGA CGCCGACGGC 
GCCGGTGTCC GTGCAGCCAA TCGGGCCATC GGCGAGGTGG AGCAGCTGGC GATGCAGGGC 
CAGCTGGAGC TTCGGGTTCT GCACCTTCCT TCAGGCAAGG ACCCCGATGA GTTCCTCAAG 
CAGAACGGGG CTGGCGATTA CCGCGCTCTG CTCGATCAGG CCCCCCTCTG GCTGGATTGG 
CAGATCGAGC AGGTGCTGGC GGAGCGCGAT CTCAGCCGGG CCGACCAGTT CCAACAGGCG 
GTCACTGCCC TGGTGGGGCT GCTGGGCAAA TTGCCCCAGT CCGCTGTGCG CACCCACTAC 
CTCCAACGGG TGGCGGAGCG CCTCAGTGGC GGCCAGGGAC GCCTGGCGCT TCAGCTCGAG 
GATGACCTGC GGCAGCAGGT GAAGGGCCAG CGTTGGCATG GGCGCTCCAG CCGTCATGAG 
CAGCCCGGTG AATCCGGACA GCGTGAGCGC TGTGAGGCCG ATCTGCTGCG GCTGTATCTG 
CATTGCCCCC GGCATCGGGC CACGATCCGC CAGGAACTGC GCAAACGCGA ACTGGAGGAT 
TTCGCCATTC CCCATCACCG CCATCTGTGG GCGGCCATTA CGGATCTCGA GGAGACCAAC 
CTGGGTGAGG GGCGCATGGA GTCGATCAGC CGTTGCGACG ACGACGGCGA GGGTCTGGAT 
CTCATCGATC TGCCCCGCTT GCTCACCGAT CAGCTTCTGC TGGAGAGCAG TGCGCTGGTG 
TCCCGCCTGA CGCCCCTTTT GGAGCCAGGT GAATTGCAGC GTGTTGCCCT AGCGGAGCCC 
CTGGAGCAGC TGCGGGGCAT TGCTGCCCTG CTGGAGCGTC AGAAAAGTTT GAAGCGCTGC 
CGGCACCTGT TGGAGGCCTG GGGCGGCCAG CGTCTGCAAA CCCTCGAATC CTGCATCGCT 
GTTCTGATTG ATCAGGAGGC TTCGTCAGAT CAGGCCTCCG TGGACATGGA GGTGCGGATT 
CAGGCCCTCT TCGATGACCT CAACCGTGAT GCGCTGCGCT ACCAGGAGCT TTATTACGCC 
GAGCGAAAAC ACATCGGCCA TCTGGATCAG CAACGTTGCG CCAGTTACAC CGTTCCCCCG 
GCCGCCTGA 

 

Protein sequence

MVNARLHPRT IEAVKERADI VDVVGEHVVL KKKGREFVGI CPFHDDSKPS MTVSPAKQFY 
YCFSCGAGGN SIKFLMEFQR QSFSDVVLDL ARRYQLPIET VDGPQQERLR QQLSRRDKLQ 
RALALAAGWF RSQLMAPAGA EALKYLSEAR ELSPATQETF QLGYAPDQWD GLLKHLQQVE 
GLAPELLEAA GLVVPRKGGN GFYDRFRHRV MVPIHDRQGR VIGFGGRSLD GSEPKYLNSP 
ETEVFEKGKH LFGLDKASNA IRKDDRAVVV EGYFDVIALH AAGITNAVAS LGTALSSQQI 
TQLCRVSDSK RIVLNFDADG AGVRAANRAI GEVEQLAMQG QLELRVLHLP SGKDPDEFLK 
QNGAGDYRAL LDQAPLWLDW QIEQVLAERD LSRADQFQQA VTALVGLLGK LPQSAVRTHY 
LQRVAERLSG GQGRLALQLE DDLRQQVKGQ RWHGRSSRHE QPGESGQRER CEADLLRLYL 
HCPRHRATIR QELRKRELED FAIPHHRHLW AAITDLEETN LGEGRMESIS RCDDDGEGLD 
LIDLPRLLTD QLLLESSALV SRLTPLLEPG ELQRVALAEP LEQLRGIAAL LERQKSLKRC 
RHLLEAWGGQ RLQTLESCIA VLIDQEASSD QASVDMEVRI QALFDDLNRD ALRYQELYYA 
ERKHIGHLDQ QRCASYTVPP AA