| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1088 |
|---|
| Symbol | |
|---|
| ID | 3737800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1024634 |
|---|
| End bp | 1025410 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637775679 |
|---|
| Product | heat shock protein DnaJ-like |
|---|
| Protein accession | YP_381400 |
|---|
| Protein GI | 78212621 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.184913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCTTTG ATCCGCGGCA TTGGTCTGGT GGACGTCCTG AACAACGGGT CACAAGCAAT
GTTGAGGCGT TGCTGGCAGA GAACGATGCT TTGCGTCGCG AGGTGTTGCG GCTCAACCGT
GAGTTGGAGC GATTGCAACG CCAACGCATT CGCACGCAAC CAAGATCCCA TCGCCCCTGG
AGTGAGCCAT CGGCTCAAGC TTCACCGCGG ATCAGCAGCC AACAGGTGCA GGCCTGGGGG
CAGGCCCTTG CTCAGCAGCC GGGATGGACG GCACTGCGTC AGCGGGGTTT GGAGCTGTTG
ATTGAGCAGC TAAACCGCAT TGGTTTTCCT GCCCACTTAA GCCTTGAACA GCGGTTGGAT
CGGTTGGTTC CGGGGCTGGG AACAGATCTC CTGGCGGCGG TGGGTGCCAA GCCGAACAAG
CAAACAACGG CAGTTCTGGC GGCGTTTGCC TTGTTTGGGG TTCGCGCTAG TGAATGGCTG
GATGAGGATT CACAGCGTGT GGTGGAGCAG CTGCGTCAGC GTCAGGAGCA ATCCGGTTCC
AGACGGCAGG GGCGCCGCAC CCGAACAGAC CAACGTCAAA CCGATCGTCC GGAAAATGGC
CATGCCCATG AATCACGCCG TGCAGCTTTA GAGGTGTTGG GCTTGGATGC CAACGCATCC
CTGGCGGAGA TCAAGCAAGC GCATCGAAAA CTGGTGAAGC AGCACCATCC CGATCTCGGT
GGTTCTGCTG AGGCGTTTCG ACGCGTCAAT GAGGCGTATC AGTCGTTGGT TCAGTAA
|
|---|
| Protein sequence | MGFDPRHWSG GRPEQRVTSN VEALLAENDA LRREVLRLNR ELERLQRQRI RTQPRSHRPW
SEPSAQASPR ISSQQVQAWG QALAQQPGWT ALRQRGLELL IEQLNRIGFP AHLSLEQRLD
RLVPGLGTDL LAAVGAKPNK QTTAVLAAFA LFGVRASEWL DEDSQRVVEQ LRQRQEQSGS
RRQGRRTRTD QRQTDRPENG HAHESRRAAL EVLGLDANAS LAEIKQAHRK LVKQHHPDLG
GSAEAFRRVN EAYQSLVQ
|
|---|
| |