| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1024 |
|---|
| Symbol | |
|---|
| ID | 3735271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 971372 |
|---|
| End bp | 975793 |
|---|
| Gene Length | 4422 bp |
|---|
| Protein Length | 1473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637775616 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_381337 |
|---|
| Protein GI | 78212558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.939062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTATCAA CCGGTTTGGT TCTGATCGGG TCTGGAACAG CGGGCTTCAT CGCCCTAGAC
CGTGCTGCCG AACGCATCCT GAGCCGTGTG CGCCCCGGAT TGGAGCGCAC GCTTTCAGGC
CCTCTGGGCC ACGACGTGGA CATTGGTCCC TATGAGGGTC TTCGCCCCCT GGGCTTGGGG
ATTGCCATTG GGCCGACTCG GATCTTGCCG TCGGCGGCGG ATCGCTCTGA GCTGAGTCTT
GCGGGGCTGG AGGTGAGCCT TGCTCCGCTG GCGAGTCTTC GGCGTCTGCA GCCGGTTCTG
CAGATCACGG TGCACAAGCT GCGCGGCCAG TTGCAGGCTA ATGAGACTGG TAGCTATTGG
ACCTTCGGAC CACTAAGTGG CGACGGCCCC CTGCCGCGGC TTGGAGTGCA ATACCGGTTG
GCCGACCCTG CGCTGATTCG TTTCGGCCCT CAGCAGCAGA CCCTTGAACT CCGCAGCCGG
GGCGCAGTTC GGCTCGGGGA GGCCTTTTTC AGCACCGCAT CGGAACTTCG CTGGGTTGAG
CGTGAAGGGG CCCTGCGGTT GGACGGTCAA GGGCATTGGG ATCGCCGCAG CTTCAGGCTT
CGAACGCGGC TGGATCGGCT CAAGCTGAAA CCATTGGCGG CCGTCATCGC CCCTGCTCAG
GATCTGGACG CCTCAGGGAC GTTGGCGGGA GATGTTCAGA TCGGCTGGGC CGATGGCGCG
TTGAACTGCC GAGGTGGGCT CAGCCTCAAG CGTCTCAAGC TTGCTGCGCT GAACAGCAAT
CGCCTCAGCT TCGCCTGCAA GGGCGATCAA CTGATACTGG AGCCCGCAAC ACTGGGGTTC
GGAGCTTTTA AGGCTCGGGC CTCAGGTTCT GTCGCCCTCA ACAAGCGCTT TGATCTCCGT
GCTGAGGTGC ACAGCTCAGA CCTCAGCTCT GCAAGCAAGG ATCGGTTGAA GATCAGGATC
CAGGGCCCCT GGGCGGAGCC CCGGTGGAGT GTTGATGGTG AGATCAAGTT GCCTGAGGCC
ATGGGGCTCA ACACAGCCCT GACGCTGGAG GGAGCCTGGC GCACCCCCTG GTTGCAAGAC
CAGCAACCCT CTGTTGCCTT GGACACCCTG CGCCTCAGTG CCCCGGGACT GCGCTTCGGG
CTGGCCGGGA CGATTGGATC CCAACTGGAT CTGCGCAGCA CGGAGCTGCA GATCGCCCCC
CGCTTCTGGT CTGCGGTTCC GTCTCTGCAG GCCGGACTGG GCCAAACCGC TCCGATCCTT
GGAGCCGTCA ACGTCACTGG TGCGTTGGCC TCACCTGAGC TGAGCCTGAA GCTTGGCCAG
GCAGCCAATC CGCTGCTGGA TCAATGGTCG TTTCTGAGCC GATGGTCCAC AGAGGATTCC
GCGCTGGTGC TGGATCGCTT CACCAGTCCT GTGTTGCGGG CGGAAGCGCG CCTGCCTTTG
CAGCTGGCGC AGGGGCGGCT GCAAGTTGGT GAACTTCAGA GCGGCTTTGA ACTCAAACCC
CTCAACCTGA GCCGTTTCAC CCCCTTGATC GGGATGCCGT TGGGGGGGCA AGTCTCGGCG
CGGGGGCGCG TGAACGGTCC GCTGTCGGCG CTGCAGCCCG ACATCAGCCT GATGCTGGAT
CAACCCCGCT TCGGAGCGTT GCAGGTTCCC GAGCGCTGGA CGGGACGTCT CAACGGTGAA
CTGGACCGTG GTGCTCGCCT GGCGATGGCG GCCCAGCAGC CCGCCGTGCC CGGCATGCTC
GAGGCCGTTC TCAATGCAGA TGCCTGGCCC CAGACCGTTC GCTTGGACCG TGGTGAGGGG
CAGTTGCGCT TGGACGGACT GGCGCCCGGT GGGGATCAAC GTCGCTACCG GTGGCGTGCG
GCAGATCTCA ACATCGATGG CCTTCGTATG ATCACTCAGC CGGCTAACCA GCCCAAAGCG
GTGGCGGGCC AGCTGACGGG TGCAGGTCGC CTGGCCATGG GCCCCCTTGC GATCCGTGGG
TCTGCCTCCA TTGCTGAACC CTCGCTGGCG GGTGTTGCCA TGCAGAGCGT TGAATTGGAG
GGCGTCCTGA CGGATGGACG TTTTCAGGCC GATGCAGTGC TCACTCCTCT GCAGGGCAGC
ATTCAGCTAA AAGCCCGTGG CGACCTGGGT GGGCGGATGC ACAGCGCGAT CGAGGCCGAA
GGCCTGGACG TGACATGGCT GACACGTCTT GCTCGTCTGC TGAGAGGGAG CGACCCCCGT
CCAGGTCTTG CTCCCGGGCG TGCTGAGGAT CTCGGAACCC TGTTCATCAA TACCTTCGGC
GGTTCCCTTG ATGGCCAGTT GCGAGCTCTG GCGGAATCGC GCCGGGCTCT CGAGGCCTAT
ACGCTGACCC ATCCGTCCAA GGGCCCAGAG CTGGAGCGCC TGGAAGGGCG GGTCAATCTG
TCCGGAACGA TCAAGGGTCC CGATCCCAAG CGCCTGAAGG CCGAGCTGAT CGCCAAGGCA
CACCTGTGGA TTGAGGGGGA CGACCAGGCC AAGGCACTCC AGCTTGAACC GGTGGTCGCA
ACGCTTCGCG GCTCACTGTT CGGTGGATCC GGAGACCTCT CCCTGCTGCA GGTTCCGATC
TCCCTTTTGG CGTTGTTGGC CCCTGTGCCG CAGCAGCTTC GCGGCAGCAT CGGCATCCGC
GGCCGCTACG ACCTCAGCGC AGCGGCTCCT CTGCTGGTTT CTGATCTGGT GCTGGATGCC
GCCAGCCTGG CGGGACAGCC TCTGACGTTG GAGCAGCGAT CAGTCATTGT TGACAGCGAG
CTGATCCGTC TGGATCTGGC TCTCAAGGGA GGAGAGAGCA AGGAAGCTGT CACCGTGACC
GGGACGGTTC CTTTCGATCC CGATGCCGAC CTGAATCTGA GGTTGGAAAG CCATGGGGAT
GCCCTGGGCG TGTTGATGGT CCTCGCTGGG GAGTCCTTCA CCGTCAAGCA GGGGAGCACG
GATCTGCGGC TGCTGCTGCG CGGGCCTTTG AACCAACCCC AGGCCAATGG CTTTGTGGTG
GTGAGCAATG GAGACCTCAG CATCGGTGAA CAGGAACTAA GCCGGATCAA CGCTTCGATC
CTGTTCGACT TCGATCAGGT CGAGGTGCAA CGACTTGAGG CCGAGGTGGG TCGCGGTGGC
GTGCTGCGCG GTTCAGGAAC CCTGGGGTTG TTCAGTCCCC AAAGCGATGT TTCACCGCTC
ACAATGCAAC TCAGCCAAGG TCAGATTCGT CAGCCGATTG TGCAGTTCCA GGCCGATGGC
GAACTGCAGG TCTCCGGCGC CCTGGTGCAG CCGGTGCTCT CGGGAAATCT GGCCCTGTCA
CGAGGCACGC TGCGGCCGCA GTCAGGATTC TTCGGACGGC TGCGACGGGG TGGACTTCGA
TCCATGGTTT CCAACGGTGT CGAGGGCCCC TCAGAGGAGG TGCGGCCCGG TGCCGAATCG
GTGATGCAAA TGCTTGCGGA GCAGTGGGAC TTCCAGGAAC CTCTGGTCCT GATGGGCCCC
AACCGAACCA TCCAGGGTCC GGATCAGCTG CAGCGGTTCA TGCCGATACT GCCGGCCATC
CGCTTTGAGA ATCTTCGGCT TGCCCTCGGC CCTGACATCG AGGTGCAGAT GCCCCCCTGG
ATCCGCTTCA AGGGTGAAGG TGCTGTCACC TTGAACGGCC CCTTGGATCC TTCTCTGGAG
GCGCGGGGCT TGATCCGACT CAATTCCGGC AGGATCTGGG TCCCCCCCCT TGCGCCGCTG
CGTTTGGATC CGCAGGCAGC GAATGCAGCG GTGTTCACAC CCTCGCTGGG GCTCGTCCCC
TACGTGGATA TCGCCATGCA AGCCAAGGTT TCTGACACCA TCAGCGCGGG CACCAGCGAT
CAGATCACCA GCGCCAATCT GTTTGCTTCG AATGGCACGG GCAGCGCGTA TGCCGAGGGT
GGTCAGCTCC GTCTGGTGAA GGTCATGGTC CAGGCCACAG GGCCGGCTAA CCGTCTGGTG
AACAGGGAAA ACCTTGTTCT CCGCAGCTCC CCACCGATGA GCGAGCAGCA GTTGCTGGGC
CTGATCGGTG GAAATTCCCT GGCTTCCCTG GGCGGAACCG GTGGCGCTGC GTTGGCCACG
ATGCTGAGCC AATCGCTGCT CTCCCCTGTG CTCGGCACGT TGACCGATGC CATGGGGCAG
CGGCTCCAGG TGGCGATTTT CCCCACTTAC GTCAATCCCG ATGTGAAATC GGAGAAGGAG
CGTACCTCCG GCCGGGTTTC GCCAACACTC ACAGTGGTGA CGGAGTTCGG TGTGGCGTTG
ACCGACAAGT TCGATCTCTC CGTGCTGATG GCACCGAACA CAACCGACGT GCCTCCGCAG
GCCACCGTTT CCTATCGCTT AACGCCAACG ACGTCAGTCT CGGCAGCCAT GGATGCCAAT
GGCACCTGGC AGAGCCAGTT GCAGGTGTTC TTCCGGTTCT GA
|
|---|
| Protein sequence | MVSTGLVLIG SGTAGFIALD RAAERILSRV RPGLERTLSG PLGHDVDIGP YEGLRPLGLG
IAIGPTRILP SAADRSELSL AGLEVSLAPL ASLRRLQPVL QITVHKLRGQ LQANETGSYW
TFGPLSGDGP LPRLGVQYRL ADPALIRFGP QQQTLELRSR GAVRLGEAFF STASELRWVE
REGALRLDGQ GHWDRRSFRL RTRLDRLKLK PLAAVIAPAQ DLDASGTLAG DVQIGWADGA
LNCRGGLSLK RLKLAALNSN RLSFACKGDQ LILEPATLGF GAFKARASGS VALNKRFDLR
AEVHSSDLSS ASKDRLKIRI QGPWAEPRWS VDGEIKLPEA MGLNTALTLE GAWRTPWLQD
QQPSVALDTL RLSAPGLRFG LAGTIGSQLD LRSTELQIAP RFWSAVPSLQ AGLGQTAPIL
GAVNVTGALA SPELSLKLGQ AANPLLDQWS FLSRWSTEDS ALVLDRFTSP VLRAEARLPL
QLAQGRLQVG ELQSGFELKP LNLSRFTPLI GMPLGGQVSA RGRVNGPLSA LQPDISLMLD
QPRFGALQVP ERWTGRLNGE LDRGARLAMA AQQPAVPGML EAVLNADAWP QTVRLDRGEG
QLRLDGLAPG GDQRRYRWRA ADLNIDGLRM ITQPANQPKA VAGQLTGAGR LAMGPLAIRG
SASIAEPSLA GVAMQSVELE GVLTDGRFQA DAVLTPLQGS IQLKARGDLG GRMHSAIEAE
GLDVTWLTRL ARLLRGSDPR PGLAPGRAED LGTLFINTFG GSLDGQLRAL AESRRALEAY
TLTHPSKGPE LERLEGRVNL SGTIKGPDPK RLKAELIAKA HLWIEGDDQA KALQLEPVVA
TLRGSLFGGS GDLSLLQVPI SLLALLAPVP QQLRGSIGIR GRYDLSAAAP LLVSDLVLDA
ASLAGQPLTL EQRSVIVDSE LIRLDLALKG GESKEAVTVT GTVPFDPDAD LNLRLESHGD
ALGVLMVLAG ESFTVKQGST DLRLLLRGPL NQPQANGFVV VSNGDLSIGE QELSRINASI
LFDFDQVEVQ RLEAEVGRGG VLRGSGTLGL FSPQSDVSPL TMQLSQGQIR QPIVQFQADG
ELQVSGALVQ PVLSGNLALS RGTLRPQSGF FGRLRRGGLR SMVSNGVEGP SEEVRPGAES
VMQMLAEQWD FQEPLVLMGP NRTIQGPDQL QRFMPILPAI RFENLRLALG PDIEVQMPPW
IRFKGEGAVT LNGPLDPSLE ARGLIRLNSG RIWVPPLAPL RLDPQAANAA VFTPSLGLVP
YVDIAMQAKV SDTISAGTSD QITSANLFAS NGTGSAYAEG GQLRLVKVMV QATGPANRLV
NRENLVLRSS PPMSEQQLLG LIGGNSLASL GGTGGAALAT MLSQSLLSPV LGTLTDAMGQ
RLQVAIFPTY VNPDVKSEKE RTSGRVSPTL TVVTEFGVAL TDKFDLSVLM APNTTDVPPQ
ATVSYRLTPT TSVSAAMDAN GTWQSQLQVF FRF
|
|---|
| |