| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1000 |
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| Symbol | |
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| ID | 3735751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 948952 |
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| End bp | 949881 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637775592 |
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| Product | type II alternative RNA polymerase sigma factor |
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| Protein accession | YP_381313 |
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| Protein GI | 78212534 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGA GTTCTCTGAG TGCTTTTCTC GGCGAAATTG GTCGCCATCA ACTGCTCACT
CCAGAGCAGG AACTTATGAT GGGGAGAAAG GTTCAGGCGA TGGTCGCCAT CACAGAACGC
TGTCATCTGG CTGGCGGGAG TGGTCCGGCC TGTGAGTACA GCGATGAAGA AAAAGGTGTA
ATTCGCCGTG GCGAACGGGC CAAGAATCAG ATGATTACGT CCAACCTTCG CCTGGTTGTC
AATCTGGCAA AGCGTTATCA GGGCAAGGGC CTGGATCTGC TTGATCTGAT TCAGGAGGGA
ACCCTTGGCC TGACCCGTGC CGTCGAGAAA TACGACCCCA CCCGCGGCCA TCGTTTCTCC
ACTTACGCCT ATTGGTGGAT TCGGCAGGGC CTGAACCGAG CACTCTCCAC CCAAAGCCGC
ACGATTCGCA TTCCTGTGAA TGTGAACGAA AAACTCACAA AATTGCGGGC CGCCAAGGCA
CGCCTGATGC AGCGCAACGG CCTTAGCCCG AGCGGTGAGC AGCTGGCGGA GTTCATGGAG
ATCCCCATCG CTGAGGTGGA GGATCTGCTG GCCTGTGAAC TGCGCAGCGT CACCGTGAGC
CTGCAGGGGG TTGTGAAATC GAAATCCGAT CCCTCAGAGC TGGTGGACGT GCTGCCAAGC
GATGAGCTGC CGCCGATGGA ACGGGCCGAG ATCGCCGAGC GCACCGCGTC GGTCTGGTCC
TTGCTGGCCA AAGCCAATCT CACCCCGAAA GAGCACACCG TTGTGACCTT GCGCTTTGGG
CTGGATGGCA CCAACGAATG GCGCACCCTC GCCGAAGTGG CTCGCCATAT GAACTGTTCC
CGTGAGTATT GCCGTCAGGT GGTGCAGCGG GCCCTGCGCA AACTGCGCAA GACAGGCATT
CAGAGCGGAC TCGTGGAATC CACACTCTGA
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| Protein sequence | MMTSSLSAFL GEIGRHQLLT PEQELMMGRK VQAMVAITER CHLAGGSGPA CEYSDEEKGV
IRRGERAKNQ MITSNLRLVV NLAKRYQGKG LDLLDLIQEG TLGLTRAVEK YDPTRGHRFS
TYAYWWIRQG LNRALSTQSR TIRIPVNVNE KLTKLRAAKA RLMQRNGLSP SGEQLAEFME
IPIAEVEDLL ACELRSVTVS LQGVVKSKSD PSELVDVLPS DELPPMERAE IAERTASVWS
LLAKANLTPK EHTVVTLRFG LDGTNEWRTL AEVARHMNCS REYCRQVVQR ALRKLRKTGI
QSGLVESTL
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