Gene Syncc9605_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0890 
Symbol 
ID3736359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp860233 
End bp861438 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content65% 
IMG OID637775490 
ProducttRNA (Guanine37-N(1)-) methyltransferase 
Protein accessionYP_381213 
Protein GI78212434 
COG category[I] Lipid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG0336] tRNA-(guanine-N1)-methyltransferase 
TIGRFAM ID[TIGR00088] tRNA (guanine-N1)-methyltransferase
[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.575468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCT ATCGCCTTGA TGTGTTGAGC CTGGCGCCGC AGGCGTTTGC TCCTCTGCTG 
GAGCTGGGGG TGATCGGTCG TGCCTTCAAC GCGGGCATTG CCGAGTTGCA TCTGCACAAC
CCCAGGGACT TCGCCACGGA TCGCCATCGC AAGGTGGACG ACGAGCCCTA TGGGGGCGGT
GCCGGCATGG TGCTCAAGCC CGAGCCGGTG TTCGCCGCGA TGGAGGCGAT TCCCCGAAGT
CCCCGCAGCC GGGTGCTGTT GATGTCACCG CAGGGGCGCC CCCTCCAGCA GGCCGATCTG
CAGCGTTGGT CCACCGAACA CGATCAACTG GTCTTCCTCT GCGGTCACTA CGAGGGCTTC
GACGAACGGA TTCGCGGCCT GGCCGATGAG GAGGTGTCGA TGGGTGATTT CGTCCTCACC
GGTGGTGAGC TGCCGGCGAT GACGGTGATC AACGGTGTTG TGCGCCTGCT GCCCGGCACG
GTTGGCACCG CTGATTCCCT GGTGGAGGAA AGCCACAGTG CACTCCTCCT GGAACACCCG
CATTACACCC GCCCCGCCGA CTTCCGCGGC ATGACCGTTC CGGATGTGCT GCGCAGTGGC
GACCACGGTT CCATCGCCCG GTGGCGCCAG GAGCAGCGGG AGCAGCGCAC CCGCGAGCGG
CGGCCCGATC TGTTTGCCCG CTGGCAGACC GCGACAATGA ATGACCCTTC AGATCCCGGC
ATGGAGCTGC GCATCGGCAA CGGATACGAC ATCCATCGGC TGGTGCCCGG TCGGGCCCTG
ATCCTGGGGG GTGTGACCCT CGACCATCCC GATGGTCTTG GTCTGGATGG CCACAGCGAT
GCCGATGTGT TGGTACATGC CGTGATGGAT GCGCTGCTCG GGGCCCTTGC CCTCGGCGAC
ATCGGCAAGT ACTTCCCCCC CACCGATCCC CAGTGGAAAG GGGCCGATAG CTTGAAGCTG
CTGGATCAGG TGGTGAAGCT GGTGAAGGAG CGCGGCTGGT CGGTGGTGAA CATCGATGCT
GTGGTGATTG CTGAGCGCCC CAAACTCAAG CCGCACATCG CTGAGATGAG CAGCCGGATG
GCGTCTGCGA TCGGCATCGC CCCCGATGCC GTGGGTGTGA AGGCCACCAC CAATGAAGGC
TTGGGTCCGG AGGGACAGGA AGAGGGCATC AGTTGCCAGG CTGTGGCTCT TCTGCAGCGG
AGCTGA
 
Protein sequence
MAPYRLDVLS LAPQAFAPLL ELGVIGRAFN AGIAELHLHN PRDFATDRHR KVDDEPYGGG 
AGMVLKPEPV FAAMEAIPRS PRSRVLLMSP QGRPLQQADL QRWSTEHDQL VFLCGHYEGF
DERIRGLADE EVSMGDFVLT GGELPAMTVI NGVVRLLPGT VGTADSLVEE SHSALLLEHP
HYTRPADFRG MTVPDVLRSG DHGSIARWRQ EQREQRTRER RPDLFARWQT ATMNDPSDPG
MELRIGNGYD IHRLVPGRAL ILGGVTLDHP DGLGLDGHSD ADVLVHAVMD ALLGALALGD
IGKYFPPTDP QWKGADSLKL LDQVVKLVKE RGWSVVNIDA VVIAERPKLK PHIAEMSSRM
ASAIGIAPDA VGVKATTNEG LGPEGQEEGI SCQAVALLQR S