Gene Syncc9605_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0836 
Symbol 
ID3737023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp805326 
End bp806555 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content60% 
IMG OID637775433 
Productglycosyltransferase 
Protein accessionYP_381159 
Protein GI78212380 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.260131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000830652 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCTCGG TTTCAGATTC CCTCCCGCAG CGCATCGCTC TGGTTCATGA ATGGTTTTCG 
CCCCGCTCAG TCGGCGGAGC TGAACAGGTT GTTCAAGAGG TTGATGCTCT TCTTCAGCGT
TTCGATTGTG AGCCACAGCT TGCCGCTCTC ATCGATGCTG AATCCCGGCG GTCAGGCAGT
TGGTTGCATG GTCGATCGGT TTTCACCAGT CCGATTCAGT TGCTCCCATG GGGACGCAGC
CACGTGCAGC AGTATCTGCC GCTTTTGCCC TTTGCGATCG AACAGATCGA CCTCAGTTCA
TTTGAGTTGG TGATCAGCAG CAGCCACCTT GTGGCCAAGG GTGTGCTCAC CGGACCAGAG
CAATTGCATA TCAGCTACGT GCACACCCCC GTGCGTTACG CCTGGGATCA GATGCACGCT
TATCTGCAGC GTTCTGCTCT GGCTCGGCGT GGTCTGGGCC CTTTGATTCG CTGGCAGTTG
CATGCTCTGC GGCAATGGGA CCAACTCAGT GCCCAGCGTG TGGATCACCT CATTGCCAAC
TCCCGTTTCA CGGCGCGTCG AATCCGCAAG TACTGGGGGC GCGAAGCCAG CGTGATCCAT
CCCCCCGTGG AGGTGGAGCG CTTTCGCTGG ACTGCCGATC GAGACGACGT CTATCTCTGC
CTGTGCCGTT TGGTTCCTTA CAAGCGGGTG GATCTGGTGG TGGAAGCCTT CAACCGCTTG
GGCCTGCCCC TGCTTGTGGT GGGGGATGGT TCAGAGCGGG CGCGATTGGA GGCCTTGGCA
GGTCCAACGG TCACCTTGCT CGGCCGTCAG TCACAGCAGC AGGTGGAAGA GCTTATGGCC
CGTTGTCGGG CCTTTGTGTA TGCCGGCCTG GAAGACTTCG GCATCGCTCC GGTGGAAGCA
ATGGCGTCTG GAGCGCCGGT GATTGGTTTG GGCCGGGGTG GTCTGTTGGA CACGGTGCGT
TGTGCAGCTG CCGGGATTCC TGAGCCCACT GGGGTGTTGT TTCCAGAACA AACCGTGGAG
TCGCTGGTGA AGGCCGTGGA GTGGTTTGAG CAGAAACGAC TTTGGCGTTC TCTGGATGCG
GAAGCCATTC GTGCCTGGGC TGAGCGCTTT CGTCCGGAAG CCTTCGCGGC GCGCTTTGAA
TCCGCACTGC GAACAGCTTG GAGCGCCCAT CAACGGGGCT GTGCCGTTGC AGCGAGTGAC
CCTGCGGAGA TGCCAGGGCT TCGCTGGTGA
 
Protein sequence
MVSVSDSLPQ RIALVHEWFS PRSVGGAEQV VQEVDALLQR FDCEPQLAAL IDAESRRSGS 
WLHGRSVFTS PIQLLPWGRS HVQQYLPLLP FAIEQIDLSS FELVISSSHL VAKGVLTGPE
QLHISYVHTP VRYAWDQMHA YLQRSALARR GLGPLIRWQL HALRQWDQLS AQRVDHLIAN
SRFTARRIRK YWGREASVIH PPVEVERFRW TADRDDVYLC LCRLVPYKRV DLVVEAFNRL
GLPLLVVGDG SERARLEALA GPTVTLLGRQ SQQQVEELMA RCRAFVYAGL EDFGIAPVEA
MASGAPVIGL GRGGLLDTVR CAAAGIPEPT GVLFPEQTVE SLVKAVEWFE QKRLWRSLDA
EAIRAWAERF RPEAFAARFE SALRTAWSAH QRGCAVAASD PAEMPGLRW