Gene Syncc9605_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0792 
Symbol 
ID3737303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp757162 
End bp757884 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID637775388 
Producthypothetical protein 
Protein accessionYP_381115 
Protein GI78212336 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.327217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0268431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCG CACCCAAGCC GATCAACGAA GCAGCCAGGC TGAGGTCCCT CAGTGAATAC 
CGGATTCTGG GAACAAAGCC TGAGAAAGCC TTTGACAACA TCACCCGGAT GGCGTCAGAG
ATCTGCCAAT CTCCGATTGC GCTGATCTCT TTGGTGGACG AGAAGCGTCA GTGGTTCAAA
TCGAAGGTGG GCCTTGAGGC CAGCGAAACC GACCGGGATA TCTCCTTCTG TGCCCATACG
ATCCTCGATT CCAAACCTCT TGTGGTGGAG GACGCACTGT TTCACGAGAA ATTCCGCGAC
AACCCCCTTG TTCAGGAAGA ACCCCACATC CGGCTCTATG CAGGCTTCCC CCTCAAAACC
GACATCAACC ACCGCATTGG AACGCTTTGC GTGATTGATC GGATTCCCAA ATCGCTCACC
AATTCGCAAT ACAAGGTGAT GGAAGGCCTG GCGGAACAGG CCACCACCCT GTTGGAACTC
AGACGCCGAT CCCTAGCCCT CATGGATGAG TTCTGCCAGA TGCATCATGC TCAGGGCTTA
ATCACCACCT GCAGCTACTG CAAGTCGATC CGCGACAGCG AAGGCTTCTG GCAACCGATC
GAACGATTCC TAATGCAGCA CAGCACGCTG AATTTCAGCC ATGGCATCTG TCCCGAATGC
ATGAACGAGC ACTTCCCCGA CGTGCAAAAC AGTCGAGCGG AGTCGTTGAA CGATCAAAGT
TGA
 
Protein sequence
MQAAPKPINE AARLRSLSEY RILGTKPEKA FDNITRMASE ICQSPIALIS LVDEKRQWFK 
SKVGLEASET DRDISFCAHT ILDSKPLVVE DALFHEKFRD NPLVQEEPHI RLYAGFPLKT
DINHRIGTLC VIDRIPKSLT NSQYKVMEGL AEQATTLLEL RRRSLALMDE FCQMHHAQGL
ITTCSYCKSI RDSEGFWQPI ERFLMQHSTL NFSHGICPEC MNEHFPDVQN SRAESLNDQS