Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0731 |
Symbol | |
ID | 3735353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 699057 |
End bp | 699764 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637775331 |
Product | short chain dehydrogenase |
Protein accession | YP_381058 |
Protein GI | 78212279 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.510402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTACGG CTCTAATCAC AGGTGCGAGC CGAGGCATAG GTCGCCGAAC TGCTGAGCTT CTGGCTCATC AGGGCTGGGA CTTGCTGCTC ACTGCACGTA GCGCTGATCA ACTGGAGCAG CTGAGTGATC AGCTCAGCTC CAAGGGTGTC TCTGTGGCCT CTGCCGCCGT CGACCTGACT CAACCTGATG GCATCGCTTT TGCGATGGCT GGCTTGTTGC AGCAGGGTGA GACCCCTTCA GTGTTGATCA ACAACGCGGG GGCTGCTTAC ACCGGCGATC TATTGGCAAT GCCGATCGAG CGTTGGCAAT GGCTGCTACA GCTGAATGTC ACCAGCGTGA TGCAGGTTTG TGCTGCTGTT GTCCCCTCCA TGCGTGAGAA CGGCGGACTG GTGATCAACA TCAGCAGCCA CGCCGCCCGC AATGCCTTCC CTCAATGGGG TGCGTATTGC GTCAGCAAAG CTGCCCTGGC CAGCTTCACC CGCTGCCTGG CGGAAGAGGA ACGGAGCAAC GACATCCGTG CCTGCACCCT CACTCTTGGG GCAGTCAACA CACCTCTGTG GGACGCGGAA ACCGTACAAA GCGATTTCGA TCGTCGTGCC ATGCTCTCTG TCGATCAGGC GGCAGAAACA CTGGCGAATC TGGCGATGCA ACCCAGCAAC CAGTTGATCG AAGACCTCAC CCTTATGCCG GCCGCCGGCG CCTTCTGA
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Protein sequence | MPTALITGAS RGIGRRTAEL LAHQGWDLLL TARSADQLEQ LSDQLSSKGV SVASAAVDLT QPDGIAFAMA GLLQQGETPS VLINNAGAAY TGDLLAMPIE RWQWLLQLNV TSVMQVCAAV VPSMRENGGL VINISSHAAR NAFPQWGAYC VSKAALASFT RCLAEEERSN DIRACTLTLG AVNTPLWDAE TVQSDFDRRA MLSVDQAAET LANLAMQPSN QLIEDLTLMP AAGAF
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