Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0572 |
Symbol | |
ID | 3737485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 557051 |
End bp | 558133 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637775171 |
Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
Protein accession | YP_380901 |
Protein GI | 78212122 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.763632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGTGT TGGCCGCCCT TTTGGTGCTA GCCCTGCTGA TCGTGGTGCA TGAGGCCGGC CATTTCCTCG CTGCGACACT CCAGGGAATT CACGTCAGCG GCTTTTCCAT TGGCTTTGGC CCAGCCCTGA TCAAGAAACA ACGGCGTGGG GTGACCTACG CCCTGCGGCT GCTGCCCCTG GGTGGTTTCG TTGCCTTCCC CGACGACGAC GAGGAGAGCA CGATCCCTGC TGATGATCCG GATCTGCTGC GCAACCGGCC GATCCCCCAG CAGGCCTTGG TGGTTGCTGC AGGCGTGTTG GCCAACCTGG CCTTGGCACT GGTGGTGCTG TTCGCTCAGG CAGCGATTGT CGGCGTGCCC GCCGCGCCAG ATCCCGGGGT CCTCGTGGTT CAGGTGCAAC CGGGTGGTGC TGCCGCCCGC TCCGGGCTTC GTGCAGGCGA CCAGATCCTC AGTCTGAATG ACCAACCCCT CGCCGCAGGA CAACGGGGCG TTGCCGCGAT GGTGCGGGAT GTGAAAGCAG CACCCGAGCA ACCCATTCGT GTGGAGCGAA AGCGGGGCGA CGCGACCTCA ACCGTTGAAC TGATCCCCGA GGATCAACAG GGCACAGGAA AAATCGGTGC CCAGCTGCAG GCCAACATCA GTGGGGAGAT GCGCCCCGTG CACAATCCCG GTGAACTGGT GCTCACCACC GGCTCGCAAT TCAGCCAAAT GCTGGAGCAA ACCGTGCGCG GCTACGCCGG GCTCCTGACC AACTTCCGAG CCACGGCAGG CCAGGTGAGT GGTCCCGTGA AGATCGTTGA GATGGGCGCT CAGCTCAGCC AGCAGGGGGG ATCCGGGTTG GCGCTGTTCT CAGCCCTGAT CTCAATCAAT TTGGCCGTGC TCAATTCCCT GCCGCTGCCG CTGCTTGATG GCTGGCAGAT GATGATGCTC GCGATTCAGT CCGTTCGGGG TCGTCCGGTG TCGGAACGGA TCCAAATGGC CTTCGTGCAA TCCGGTTTTC TTCTTCTGGT GGGGCTCACG CTTGTGCTGA TCGTGCGTGA CACCACACAA CTGCCGGTGG TCCAGCAATT GATGGGTCGC TGA
|
Protein sequence | MNVLAALLVL ALLIVVHEAG HFLAATLQGI HVSGFSIGFG PALIKKQRRG VTYALRLLPL GGFVAFPDDD EESTIPADDP DLLRNRPIPQ QALVVAAGVL ANLALALVVL FAQAAIVGVP AAPDPGVLVV QVQPGGAAAR SGLRAGDQIL SLNDQPLAAG QRGVAAMVRD VKAAPEQPIR VERKRGDATS TVELIPEDQQ GTGKIGAQLQ ANISGEMRPV HNPGELVLTT GSQFSQMLEQ TVRGYAGLLT NFRATAGQVS GPVKIVEMGA QLSQQGGSGL ALFSALISIN LAVLNSLPLP LLDGWQMMML AIQSVRGRPV SERIQMAFVQ SGFLLLVGLT LVLIVRDTTQ LPVVQQLMGR
|
| |