| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0498 |
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| Symbol | |
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| ID | 3735324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 487960 |
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| End bp | 489621 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637775094 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_380827 |
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| Protein GI | 78212048 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.383316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0360992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAG CGCTTACGTG GTGGTCAGGG ACGGTCATCT ATCAGCTGAT CGTTCGCAGC
TATTCCGATG GGAATGGCGA TGGCACCGGT GATTTCAAGG GGCTTGCGGC ACGGTTGCCC
TATCTGCGTT GGCTGGGGGT TAACACCCTC TGGTTGACCC CGATCTATCC CTCCCCCCTG
CGGGACGGGG GCTATGACAT CACCGATTTC ACCGGAATCC ATCCGGATCT GGGGGATCTC
TCCTCTTTCC ATCGGTTCCT CACGGCGGCC CACAGCCAGG GCATGCGCGT GATTTTGGAC
CTGGTGCTGA ACCACACCAG TGACCTGCAT CCCTGGTTCC AGCGGGCCCG CTGGGCTCCT
AAGGGCAGTC CTGAACGGGA TGTGTACGTC TGGAGCGACG ACCCCAAGCG CTACGCCGAG
GCACCGGTTC TGTTCCGGCA CTTTGAGGCT TCCAACTGGG AGTGGGATCC GGTTGCCGAG
CAGTACTACC TGCACCGTTT CCTGCGTCAT CAACCCGATC TCAATTACGA GAACCCCTGG
GTGCAGGACA CGATGCTGGA GGTGGTCGAC TTCTGGCTGG ATCGCGGCGT CGACGGGTTC
CGTCTGGATG CGGTTCCGTT CCTGTTCGAG TCAGAGGGGA CCCGCTGCGA GGGGTTGCCG
GAAACCCATG CCTTCCTCAC GCGTTTGCGG GAGCGGGTGG ATGCCCATGG CCGTGATGTG
CTCTTGCTGG GAGAGGCGAT TCAGCCGGTG GAGGAGGCCG CTCCCTACTT GGCGGATGAC
GAATTGCACG GCGCCTTCAA CTTCGTGCTC ACCGCTCATT TGTTTGCCGC CATTGCCAGT
GGCCGCACCC AACAGCTCGG AGAGTGTCTG ATGCAAGCTG AGCAGGCGGT ATCCGGCCCC
CGCTGGGCCC TGCCCCTGCG CAATCACGAT GAACTCTGGT TGGGGGATGG TCATCTCGTC
AGCGATGAGG TGATTCAGAC CATCCGGGTG GGCCTGCCCC AGGGGCAGGG GCACTGGTTG
AACTGGGGCA TCAATCGCCG CCTGGCTCCT CTTCTCAATG GCGATCCACG CTCCAACCGG
TTGCTGCATG GGCTCCTCTA CAGCCTTCCG GGGATGCCAT GTCTGTATTA CGGCGATGAA
CTGGGCATGG GCGACTGGCC CGGTCTGCGG GACCGCGATC CCAATCGCAC GCCGATGGCC
TGGACGCCGG CTCGCAACGG TGGCTTCTCC ACGGCCCCTG ATCCGCTGTT GGTGCTGCCC
CCCATCACCG CTCCCGGCTA CGACTACCGC GTAGTGAATG TGGAGGTGCA GAAGCAGCTG
CCCGGGTCGC TGCTGAATTG GCATCGGCGC ATGCTCACCT GCCGCCGGCT GCTGCCAGCT
CTGCGGCATG GAAGCTTCCG CTTGCTGTAC AGCCCCCACC CCGGAGTGCT GGTGTATCTC
CGCTGCACCG AGGCGATGAC GGTGCTCGTG GCCGCCAATG TCACCGCTGC TGGAGCCTCT
CTCAGTTTGG ATCTGTCGGA GTGGACCGGC GAGCGCACCC GTGAGGTGAT GTGGGGCTGT
GAGTTCCCGC CTGCCGCAGC GGAGTGGTTT GTGAACCTTC CTCCCTATGG ATTCAACTGG
TGGTTGATCG GAGAGGTGGA GCCCGCCGCC ACGGCTGCCT GA
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| Protein sequence | MTPALTWWSG TVIYQLIVRS YSDGNGDGTG DFKGLAARLP YLRWLGVNTL WLTPIYPSPL
RDGGYDITDF TGIHPDLGDL SSFHRFLTAA HSQGMRVILD LVLNHTSDLH PWFQRARWAP
KGSPERDVYV WSDDPKRYAE APVLFRHFEA SNWEWDPVAE QYYLHRFLRH QPDLNYENPW
VQDTMLEVVD FWLDRGVDGF RLDAVPFLFE SEGTRCEGLP ETHAFLTRLR ERVDAHGRDV
LLLGEAIQPV EEAAPYLADD ELHGAFNFVL TAHLFAAIAS GRTQQLGECL MQAEQAVSGP
RWALPLRNHD ELWLGDGHLV SDEVIQTIRV GLPQGQGHWL NWGINRRLAP LLNGDPRSNR
LLHGLLYSLP GMPCLYYGDE LGMGDWPGLR DRDPNRTPMA WTPARNGGFS TAPDPLLVLP
PITAPGYDYR VVNVEVQKQL PGSLLNWHRR MLTCRRLLPA LRHGSFRLLY SPHPGVLVYL
RCTEAMTVLV AANVTAAGAS LSLDLSEWTG ERTREVMWGC EFPPAAAEWF VNLPPYGFNW
WLIGEVEPAA TAA
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