Gene Syncc9605_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0379 
Symbol 
ID3736566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp379709 
End bp381349 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content66% 
IMG OID637774966 
ProductATPase 
Protein accessionYP_380710 
Protein GI78211931 
COG category[S] Function unknown 
COG ID[COG3854] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.788965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGC AACGGGTCAC CGACGATCTG GATCGCCTCC TCGAGCTCCT GCCGGAGGCC 
GTGCGGGAGC AGTTGCGGCC GGTGGAGGCG CGGCAGCAGT TGCTTGAGGT GGTGCTCGAT
CTCGGTCGGG TTCCGGAAGC GCGTTATCCA GGCCGTGCCC TGGCGCTGGG CTCCACGCCC
CTGTCCCGCG AGGATCTCGC GGTCGTGGTG GCCAGGCTTG GTCAGTTCGG TGGCGATAAC
CGTGCGGGAA TCGAACGAAC GCTTCACCGG ATCAGCGCGA TCCGCAACCG TCAGGGCGAC
GTGGTCGGTC TGACCTGCCG GGTGGGCCGA GCCGTGTTCG GCACCGTTGC CATGGTGCGG
GACCTTCTGG ATGGAGGGCA GTCCCTGCTG TTGATGGGGC GCCCGGGTGT GGGCAAGACA
ACGGCGTTGC GCGAGATCGC TCGGGTGCTT GCGGATGAGC TGGAGCGGCG CGTGGTTGTG
ATCGACACGA GCAATGAGAT CGCCGGTGAT GGCGACATTC CGCACCCCGC GATCGGTCGG
GCCCGCCGCA TGCAGGTGGC CAGGCCTGAG CTGCAGCACC AAACCATGAT CGAGGCGGTG
GAAAACCACA TGCCCGAAGT CATCGTGATC GATGAGATCG GCACGGAGCT GGAGGCGCAG
GCCGCGCGCA CCATCGCTGA ACGTGGCGTG GTGCTGGTCG CCACAGCCCA CGGCAATGCT
TTGGCCAACC TGATCAAGAA CCCCACCCTC AGCGATCTGG TGGGGGGAAT ACAGGCGGTC
ACCCTCGGGG ATGAGGAGGC CCGGAGGCGG CGCAGTCAAA AAACGGTGTT GGAGCGCGCC
GCCGAACCGA CGTTTCCGGT GGCGGTTGAA ATGCACAGCC GTCAGCGATG GGCCGTGCAC
ACCGACGTTG CCGCCACCGT GGATCAATTG CTCCGGGGCC TGAAGCCAAG GGTTCAGGAG
CGCGAGCTGA CGCCTGAAGG GGGCGTTCAG CTGGTGGACC CGCCGCAATC TTCGGGTCTG
CTGCGGCCTC CGTCCCAGCG GTCGTTCGCG GATCAGCCGG TCTCTGTTCC CGTGCCCATG
CCTGCGGCCA GTGACCGAGA GGTCAGTGCA GCAGAGAAAC CAGCTTCGCC GGAGACCAGC
GCCGAGCATC TGCAGGTTCT CTGTTGCGGG GTTCCTCCCC GTGTGGTGGA GGAGGCCATC
CGGTCCCACG GCTGGAAGGC GCGGGTTGTG GAGGACTTGA GTGAGGCCGA TGTGGTGTTG
AGCGTTCGGC TGGGTCTCAG TCGTCAACCA TCACTGCGCC GTCAGGTCAG GGATCTGGGG
ATCCCGATCC TGGTGATCAA GTCCGACACT CTGCCCCAGG TGACCCGTGC CATGGCCCGT
CTTCTGCGCC GTCAGGCCAC CGAAACAGCC CCAGAGGTCA CCCCGCCGGA TCAGGCGTCT
CAGGACGATG AATTGGCTGC TCTCGAAGAA TGCCGTCTTG CGGTGGAACA GGTGGTGATG
CCGCAAGGCC GGCCGGTGGA GTTGCTGCCT CGCAGCGAGC GTGTTCTCCG GATGCAGGCC
GACCTCGTGC GCCGTTACCG ACTGCGCAGC GATGTTTTCG GTGAGGCTGA AATGTCAAGG
CTGAGGGTTT TCCCCCGCTG A
 
Protein sequence
MGTQRVTDDL DRLLELLPEA VREQLRPVEA RQQLLEVVLD LGRVPEARYP GRALALGSTP 
LSREDLAVVV ARLGQFGGDN RAGIERTLHR ISAIRNRQGD VVGLTCRVGR AVFGTVAMVR
DLLDGGQSLL LMGRPGVGKT TALREIARVL ADELERRVVV IDTSNEIAGD GDIPHPAIGR
ARRMQVARPE LQHQTMIEAV ENHMPEVIVI DEIGTELEAQ AARTIAERGV VLVATAHGNA
LANLIKNPTL SDLVGGIQAV TLGDEEARRR RSQKTVLERA AEPTFPVAVE MHSRQRWAVH
TDVAATVDQL LRGLKPRVQE RELTPEGGVQ LVDPPQSSGL LRPPSQRSFA DQPVSVPVPM
PAASDREVSA AEKPASPETS AEHLQVLCCG VPPRVVEEAI RSHGWKARVV EDLSEADVVL
SVRLGLSRQP SLRRQVRDLG IPILVIKSDT LPQVTRAMAR LLRRQATETA PEVTPPDQAS
QDDELAALEE CRLAVEQVVM PQGRPVELLP RSERVLRMQA DLVRRYRLRS DVFGEAEMSR
LRVFPR