Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0351 |
Symbol | truA |
ID | 3736843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 363780 |
End bp | 364661 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637774938 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_380682 |
Protein GI | 78211903 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.89141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACACCG AACCCTCGTC TGCAGGTCCT GAGCCGGCAT CCCTTCAGCG GATCGCGCTC AGCCTTCAGT ACGACGGTTC TTCGTTTTGT GGGTGGCAGC GCCAACGCAA CGGTCGCAGT GTTCAGGCAG TACTGGAGGA CGCCATCGCC CAGCTCGATC CGCACCGACC GGTGCAGACC TTTGCCGCTG GTCGCACCGA TGCCGGCGTT CATGCCGCCG GTCAGGTGGT GCACTTCGAC TGCAGTGGAC CGATCCCAGC GCGCAAATGG GCCCCGGCCT TGAACGGACG CCTGCCGAGC ACCATTCGTG TGCGCGAATC GGTCGCCCGT CCCCTGGATT GGCATGCCTG TTACTCCGCC ACCTACAGGC GGTACCGGTA CACGATTCAC AACGGCCGCC GCCCCAATTT GTTTTTAAGC CCCTGGAGCT GGCACTGCTA CCAACACAGG CTGGATGAGT CCCGCATGCG GGACGCTTTG AGCAGCATGC TTGGTCTGCA CGACTTCAGC GCCTTCATGA AGGCAGGCAG CCGTCGCGCC CATGCCCGAA CCACCGTGCA GGAGGTGCTC GTGGAGCGCC AAGGCGATCT TCTGCGAGTC GAAATTCAGG CCAGTGGTTT TCTGTACGGC ATGGTTCGCC TGCTGATGGC CCAATTGGTG GCCGTTGGCG AGCACCGCCT GAGTGTTGCC GCCTTTGAAC AGCGCTGGCG GGAACGACGA CGCCACGAGG TGAAGGAGGC GGCACCCGCC GCGGGCCTCT GCCTGCTTCG GGCTGGCTAT GCCAAGCCCA TCTTCACCAA AGCCGGCTGG TACGATAGTC AACCGTGGTT TTTTCTGGCC GAGAGCGATC CCCCTACGGA TCCACCCTCA ACGCCGGGAT AA
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Protein sequence | MNTEPSSAGP EPASLQRIAL SLQYDGSSFC GWQRQRNGRS VQAVLEDAIA QLDPHRPVQT FAAGRTDAGV HAAGQVVHFD CSGPIPARKW APALNGRLPS TIRVRESVAR PLDWHACYSA TYRRYRYTIH NGRRPNLFLS PWSWHCYQHR LDESRMRDAL SSMLGLHDFS AFMKAGSRRA HARTTVQEVL VERQGDLLRV EIQASGFLYG MVRLLMAQLV AVGEHRLSVA AFEQRWRERR RHEVKEAAPA AGLCLLRAGY AKPIFTKAGW YDSQPWFFLA ESDPPTDPPS TPG
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