Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0293 |
Symbol | |
ID | 3735978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 297572 |
End bp | 299086 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637774876 |
Product | putative type 2 NADH dehydrogenase |
Protein accession | YP_380624 |
Protein GI | 78211845 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.236427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGGCA ACCATTACTT TCTGGAACTT GAACCGCCAG CTGAGCGGCT GCGTGATGCC CCGCATGTGG TCATCGTTGG CGGCGGCTTT GCAGGGGTGC ATGCCTGCAA AGCCCTGGCC AAGGCCGATG TGCGCATCAC CCTGATTGAC AAGCGCAACT TCAACCTGTT TCAGCCGTTG CTGTATCAGG TTGCTACCGG ATTGGTCTCA AGGAGCGATG TCGCCACCCC TCTGAGAGAA CTGGTGGGGA CGCAAGGCAA CGTGCAGGTG CTCCTGGGCG AGGTCACCGC GGTGAACCCC GAGGGCAAGC AGATCGTGTT CAACGGCAAG GCCTACAGCT ATGACCATCT GATCCTGGCG ACGGGTTCGG GCAGCACCTA CTTCGGCCAT GAGGACTGGC GCACCTTTGC GCCCCCGATG AAAATCCTCG AGCACGCCGA AGAGATTCGA CGCCGTCTGC TGATGGCGAT GGAGCAGGCA GAGCAGACGC CGAATCCCGA GGCTCGCCAA TTTCTGCAGA CCGTTGTGAT TGTGGGCGGA GGCCCCACCG GTTGTGAGAT GGCTGGCGCC GTTTCAGAGC TCATGCGGTG GGCTCTGAAC AGTGCCTTCA AACAGCTTGA TTCTCAGAAA ACGAGAATCG TGTTGGTGGA CCCCGGCGAC AGGGTTCTGA GAGCGATGCC AGAAGAGCTC TCCAAAGATG CTCAGAAAAC CCTTGAGCTG AATGGCGTGG AATTCATACC CCAAGGCCGC GTCCAAACCA TGCGACCCGG AGAGGTTGTG ATCAGCAGCC CAGATGGGGA TGTTCGTATC CAGGCGGCAA CGGTGATCTG GACCGCTGGA GTCAAACCAT CCCATCTGGG ACAGAAGCTG ACAGAGGCCA CGGGCTGCGA ACTCGATCGC GGTGGGAGGG TGATCGTCAA TCCCGATTTC TCGATTCCGA ACCATCCCGA GATCCGCATT GCCGGTGATC TCTGCAGCTA CAGCCACACC GTGAATGGCA AGCCACTGCC TGGGATGGCC GCTCCCGCCA AACAGGCCGG CACATTCATC GGCAAGGACA TCGCCGCGAT CGTGGCTGGT CAAGACCGCC CCACGTTCCG CTATTTCGAT TTCGGCAGCA TGGCCGTAGT GCAGGCGAGT GCCGTCGCCG ACCTGCATGG CTTCAAAGTT TCCGGCCGAA TGGGTCTGCT GCTTTGGGCC ATCGTCCACC TGGCTTTGAT GCCGAACCGG GAGAACCGGA TCACGTTGAG CATCAAGTGG TTGTACGTGC TTGCTACCCG TGAGCGGGCC TCAATTCTGC TCACAGGCAT GCCGAGCCAG CATCTGGCCC TTGATGCGGA GGATGCCCAC TTCCCGATGG CCAGCGGCAA AGGTCCCTCC ATCGCCGAAC CCGATGCCGC CCTCAAGGCA GCCATGGATT ACTACGCCCA TCAGCTCAGT GGCCTTCCCC AAACTCAGGA GCTGCTCGAC ACCAAGGATG CTTCAGCTGC GGATTCGGAA GCTGCCATCA AATAG
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Protein sequence | MAGNHYFLEL EPPAERLRDA PHVVIVGGGF AGVHACKALA KADVRITLID KRNFNLFQPL LYQVATGLVS RSDVATPLRE LVGTQGNVQV LLGEVTAVNP EGKQIVFNGK AYSYDHLILA TGSGSTYFGH EDWRTFAPPM KILEHAEEIR RRLLMAMEQA EQTPNPEARQ FLQTVVIVGG GPTGCEMAGA VSELMRWALN SAFKQLDSQK TRIVLVDPGD RVLRAMPEEL SKDAQKTLEL NGVEFIPQGR VQTMRPGEVV ISSPDGDVRI QAATVIWTAG VKPSHLGQKL TEATGCELDR GGRVIVNPDF SIPNHPEIRI AGDLCSYSHT VNGKPLPGMA APAKQAGTFI GKDIAAIVAG QDRPTFRYFD FGSMAVVQAS AVADLHGFKV SGRMGLLLWA IVHLALMPNR ENRITLSIKW LYVLATRERA SILLTGMPSQ HLALDAEDAH FPMASGKGPS IAEPDAALKA AMDYYAHQLS GLPQTQELLD TKDASAADSE AAIK
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