| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0194 |
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| Symbol | |
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| ID | 3736141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 204725 |
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| End bp | 207817 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637774774 |
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| Product | lipopolysaccharide biosynthesis protein-like |
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| Protein accession | YP_380525 |
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| Protein GI | 78211746 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.478179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.202033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATT CCCTCGCTAA GCAGTTCTCA CATTTTCTTT CCTCTGGAGA TTACAGTTCA
GCCAACCAAA TCGTAAATCA AGCACGTAAT TTAAATTATC CTGTTGGTCT AATCAGTTCA
TGGGAAAATC TTCTTGCAAA GACAAATCCT GGCTTTGTTC ACCCATTAGA TGCTGTTGTA
AGTCAAGAAT ATAATGTTGA TAATTTATGT AGCGAGTTGA CCCCTGATTT AAGAGCAGTT
TTTGAAGAAA AAATTTCTGA GTATAGCAAA AAAAATAATA TAGATTCGAA TTTAATTGAC
AAAATAGTCG AATTAGTTTT TGACAATTTT CAAATCGATA CCGGAAGAAT AATTATTCCT
GATTTAACGT CCAATGATCC AATAGCCAAT CTCTTTCATT ACTCCGTCAA GGAATACTCA
ATTGATAATC CTGATGTCCC TGAAGCCGTT GATCGTGGAG TTTGTGTTTC AGTAATTGAT
CATTTTCTAA GATACGGTTA TATAGAAATT CTGGAAGGTA GGCGTCATTC ATCACTTTCT
TTCTCTCATG CTAAGAAAAA ATATGACGGG AATCTTCTTT ATATCGTAGA TAATTACGAT
GATTTGGATG AATCTGAAAG GCTAGATCTA AAGTCTCTTC AATTATCTAA GTTGCATGCA
GATGTATACA GTATAAAGGA TACTTGTGTG TATACACACA ATGGTTCATC CATGACTATA
GAGCAATATC TCTTTTATAA TATCTCAGAT GATCACAATC TCTGCATACT TTTAAAGGGT
AAGACGTTGA CCCGATCTGC AGCAAAATGG ATTGTTGATA TCAAACTAGA AGATCGGACT
GCTATTTTCG GCTATTCAGC TAATAACGGA AGATTTTGTG CTGTTACCGA GTACTCACGA
CCTAATATGT TGATTTCTGA TATTACAAAT GGCTGCATTA TTGCAAACTC AATTGAAGTC
TTGGCCGTTG TAAGTAGTCT TAAAGATTAT CAAACTGCAT ATGGATATTT TCATGCTTTG
GTGCTCGAGT TAGAGGATTT TGGAGTAGAA TTTAACTTGA AGAGAGAAAT CTTGAGTGAA
TCATTTAGCA AAGCTATTGC TAATTTTGAT TCCACTCATT CTACTTATTG GTCGCCTTTT
TACTACTTGA ATGATTATAA ATCAAGTTTT TTCCCAATTA GGAGAGACTT GGTGAAGACC
TGGCAGAAAC AGCTAGCTTC TATTGACCAA TCTGATAAAT CTGAAAGTAC TAAAAGTTCA
CTTCATGTTG ATGGTGAAAA TTCAATTGTT AAATTTATAC CGAGCCTGAA TAATTCTGTT
GGCGTTGTAA TACCCTTCAA AGATAAGATT CACCTTTTAG AAGATTGTGT AAAATCTCTC
ATTCTTAACG AAGAAGAGGT AGCATTGAAA ATCTATGCTA TTAATAATGG TTCAATTGAA
CCTAAAACAT TTGAGGTATT GGATCGCCTA AAAAATCAAT ATGAAGATCT TTTTGTTTGC
ATTGATTTTC CTGGTGAGTT TAATTACGCT AAAATTAACA ATTACGCCGT AGATTTTGTT
GAAGAGGAAT ATCTATTATT TTTAAATAAC GATATCGTAA TTGAATCTAG TTTCGCGGTC
ACCACATTGC TTAAAACGCA CTGTTTTTAT AACGCCGTTA TTACTGGTTC AAAATTGTTA
TATCCAAGTG GAAAAATTCA GCACAATGGT CTTTCTTCGA CCATGGAAAA ACATATTGCG
ATCAACAGTC CATTCTCTCG TCACTATACA CATTCAAACC ACGGATTCTC TTTAGACCAT
TATGTTCATC CATGGGAGCG GACTCATGAA TGCTCTGCTG TAACAGCTGC ATGTATGATT
ATGAAGAAGG AAGAATTTCT TAGAATAGAT GGCTTTGATG AGGATTTCAA AGTTGCTTAT
AATGATGTTG ATCTATGCTT TAGAGCCACA AAAGAATATC ATCAGCGACC TATAATTTGC
TCTACTGAGG TAAAGATATA TCATTTAGAA TCTGAATCTA GAGGTGATGA TAACGATGAT
GAATCTGGAA CCCGGCTTTA TCATGAAAGG GTAAATTTAG TTTCTCGTCA CGAGGATATA
TTCTCTCGTC CAGATAAATT CACTGGTGTT AGTACAGTCT TCAATAATCT TCAGAAAATT
GTAAAAACAA GTTTTGATCG TAAGTTTATT GATCATACTT CAAAGCCTAG CTCAGATATA
GAGCTTGACG ATCTCGTACT TCATCAGGTG CATAACTCGA TGAAACAAAG ATATGCCTGT
ATATTTGTAC ATTATGATAT AGATCCTTTG ATTACAGATG ATTGTGTTTA TCATCTTGAA
AAACTAAGTG AATATTGCGA TATCTTCTTC GTGTCCAGCT CAGAATGTTT GGCCAATGCT
CCTGAAGAAG TTGAAAAAAT CAAGCCTCTT TGTTCCCAAA TTCTAATTCG TAAAAATAGT
GGATATGATT TTGGATGTTG GTCTCATGTA ATCAGAAAAA ATTATGCTCG TTTGTGTAAT
TACGAAGGCG TCTTACTTGC TAATGACAGC AATTGGGGCC CTTTGAATGA TTTTTCGGAT
ACTTTCGCCA GGATCAATCG TTATTCTTCA GAAGCAGATT TCATGGGATT AACTTCGTCA
ATTACTCCGT CGTGGCACTT GCAAAGCTTT TTCATATTTT ACTCTAGAAA GGTGTTTAGT
TCTTCGTTTT TTAAGTTGTA TTGGTTTAAT ATAGGCATAT TAGATTCTAA ATATGAAATT
ATAATGAACT ACGAGGTTGG CTGGTCTGCT CGCCTGGTCC GTCTTGGCTT CAAAGGAATT
GCTCTATACG GAACCTCTGA GGCTACAAAT CCAACTCATG TTAATTGGGA GTCCCTGCTT
CGCTCAAGAT ATCCTTATCT GAAGAAAGAG CTGATTAGAG ATAATCCTTT AAAAATTAAT
CTAGATAATT TGCCGAATAT ACTTAGATCG CAAGACTTAA ACTGGCAGGC TTCAATTTTG
GATTACTTAA AACGTTATAA TCGTGAGAAC TCTGAGACAG CGAAATTATT TTCATCCTCT
AAATCATCAG TGATAAAATC TGGCATGGAC TAA
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| Protein sequence | MDNSLAKQFS HFLSSGDYSS ANQIVNQARN LNYPVGLISS WENLLAKTNP GFVHPLDAVV
SQEYNVDNLC SELTPDLRAV FEEKISEYSK KNNIDSNLID KIVELVFDNF QIDTGRIIIP
DLTSNDPIAN LFHYSVKEYS IDNPDVPEAV DRGVCVSVID HFLRYGYIEI LEGRRHSSLS
FSHAKKKYDG NLLYIVDNYD DLDESERLDL KSLQLSKLHA DVYSIKDTCV YTHNGSSMTI
EQYLFYNISD DHNLCILLKG KTLTRSAAKW IVDIKLEDRT AIFGYSANNG RFCAVTEYSR
PNMLISDITN GCIIANSIEV LAVVSSLKDY QTAYGYFHAL VLELEDFGVE FNLKREILSE
SFSKAIANFD STHSTYWSPF YYLNDYKSSF FPIRRDLVKT WQKQLASIDQ SDKSESTKSS
LHVDGENSIV KFIPSLNNSV GVVIPFKDKI HLLEDCVKSL ILNEEEVALK IYAINNGSIE
PKTFEVLDRL KNQYEDLFVC IDFPGEFNYA KINNYAVDFV EEEYLLFLNN DIVIESSFAV
TTLLKTHCFY NAVITGSKLL YPSGKIQHNG LSSTMEKHIA INSPFSRHYT HSNHGFSLDH
YVHPWERTHE CSAVTAACMI MKKEEFLRID GFDEDFKVAY NDVDLCFRAT KEYHQRPIIC
STEVKIYHLE SESRGDDNDD ESGTRLYHER VNLVSRHEDI FSRPDKFTGV STVFNNLQKI
VKTSFDRKFI DHTSKPSSDI ELDDLVLHQV HNSMKQRYAC IFVHYDIDPL ITDDCVYHLE
KLSEYCDIFF VSSSECLANA PEEVEKIKPL CSQILIRKNS GYDFGCWSHV IRKNYARLCN
YEGVLLANDS NWGPLNDFSD TFARINRYSS EADFMGLTSS ITPSWHLQSF FIFYSRKVFS
SSFFKLYWFN IGILDSKYEI IMNYEVGWSA RLVRLGFKGI ALYGTSEATN PTHVNWESLL
RSRYPYLKKE LIRDNPLKIN LDNLPNILRS QDLNWQASIL DYLKRYNREN SETAKLFSSS
KSSVIKSGMD
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