Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0189 |
Symbol | |
ID | 3736269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 197953 |
End bp | 198903 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637774769 |
Product | putative nucleoside-diphosphate sugar epimerase |
Protein accession | YP_380520 |
Protein GI | 78211741 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.496773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00806939 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGATCC ACCTCGTCAC TGGCGGTGCC GGCTTCCTTG GCTCTCACCT GATCGATCGT CTGATGGAGG CCGGTGATGA GGTGATCTGC CTCGACAACT ACTTCACGGG GCGTAAGGCC AACATTGCCC GCTGGATTGG CCATCCACGG TTCGAACTCA TCCGTCACGA CGTCACCGAA CCGATCAAGC TCGAGGTGGA TCGGATCTGG CATCTAGCTT GCCCTGCCTC GCCGATTCAC TATCAGTTCA ATCCGGTCAA GACAGCCAAA ACCAGCTTTC TCGGCACTTA CAACATGCTG GGCCTGGCGC GGCGGGTGGG TGCGCGGCTG CTGCTCGCCA GCACAAGTGA GGTCTACGGA GATCCTGAGG TCCACCCTCA ACCGGAGAGT TACTGGGGCT CCGTCAATCC CATCGGTGTC CGCAGTTGCT ACGACGAGGG CAAGCGCATC GCAGAAACCC TCTGTTTCGA TTACCAACGC ATGAATGATG TGGAGGTGCG GGTGGCGCGC ATCTTCAACA CCTATGGCCC CCGAATGCTC CCCGATGACG GCCGGGTGGT GAGCAACTTC ATCGTGCAGG CCCTGCGGGG CGAACCGTTG ACGCTGTACG GCGATGGCAG TCAGACCCGC TCCTTTTGTT ATGTGAGCGA TCTGATTGAG GGCTTGATCC GCCTGATGAA CGGCGATCAC ACCGGCCCCA TCAACTTGGG CAATCCCGCT GAATTCACGA TCCGTGAGCT GGCGGAGCTG GTCCGCCAGC AGATAAGGCC GAATCTGCCG TTGATGGAAA AGCCATTGCC GCAAGACGAC CCTCGCCAGC GGCAGCCCGC GATAAATTTT GCCCGTCAGC AGCTCAACTG GGAGCCGACT GTGTCACTGG AGCAGGGTCT GGCTCCCACC ATCCACTCCT TCCGTAATCT CCTCGAAATC GCCGAAGGCT GCGGGACGTG A
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Protein sequence | MQIHLVTGGA GFLGSHLIDR LMEAGDEVIC LDNYFTGRKA NIARWIGHPR FELIRHDVTE PIKLEVDRIW HLACPASPIH YQFNPVKTAK TSFLGTYNML GLARRVGARL LLASTSEVYG DPEVHPQPES YWGSVNPIGV RSCYDEGKRI AETLCFDYQR MNDVEVRVAR IFNTYGPRML PDDGRVVSNF IVQALRGEPL TLYGDGSQTR SFCYVSDLIE GLIRLMNGDH TGPINLGNPA EFTIRELAEL VRQQIRPNLP LMEKPLPQDD PRQRQPAINF ARQQLNWEPT VSLEQGLAPT IHSFRNLLEI AEGCGT
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