| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0188 |
|---|
| Symbol | hisS |
|---|
| ID | 3736268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 196613 |
|---|
| End bp | 197950 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637774768 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_380519 |
|---|
| Protein GI | 78211740 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.207705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00812888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCCAC CCGGCAGACT GAGCCGCTGT ACCTGCATCC TGCACGTGAG TCAGCTCCAG
AGCCTCAGGG GCATGGTCGA TCTGTTGCCG GAGGTGCTTC AGCGTTGGCA GGCGGTTGAG
GCCAAAGCGC GCGAGCACTT CCAGCGTTCT GGGTTCGGTG AAATTCGGAC GCCGCTGTTG
GAGACAACGG ATCTGTTCTG CCGAGGCATC GGTGAGGGCA CCGATGTGGT GGGTAAGGAG
ATGTACAGCT TTCAGGATCG GGGCGATCGC TCCTGCACAT TGCGGCCCGA AGGAACTGCA
TCGGTGGTGC GTGCCGCCCT GCAGCACGGC TTGCTCAGCC AGGGCGCTCA GAAGCTCTGG
TATGCCGGGC CGATGTTTCG CTATGAGCGC CCCCAGGCTG GCCGACAGCG GCAGTTCCAT
CAGATCGGGG TGGAGTGGCT TGGAGCTGAG CGGGCCCGCA GTGATGTTGA GGTGATTGCC
CTGGCCTGGG ATCTGCTGGC TTCCCTCGGT GTGGGCGGTT TGCAGTTGGA GCTGAACAGC
CTTGGCACCG CTGAAGACCG TAAGGCCTAT CGCAATGCTC TGGTGGCCTG GCTTGAGCAG
CGATCGGAGG TCCTTGATCC TGATTCCCAG GCGCGGCTGA GCACCAATCC CCTGCGCATC
CTGGATTCCA AAAACAAGAA CACCCAGGCG CTGCTGGAAG ATGCACCCAC GCTGGTGGAT
GCTCTCTCTG ATGCCAGCCG TGAGCGTTTC GAAGAGGTAC AGCGTGGGCT GACTTCCCTT
GGGATTCACT TCCTGTTGAA TCCCCGATTG GTGCGTGGCT TGGATTACTA CAGCCACACA
GCTTTCGAGA TCACCAGCGA TCAACTTGGG GCCCAGGCCA CTGTTTGTGG GGGTGGTCGT
TACGACGGCC TGATCGGCCA GTTGGGAGGT CCTCAGACCC CTGCCATCGG ATGGGCCCTT
GGCATGGAAC GGTTGTTGCT GGTGTTGGAA GCGGCAGCGA AGGCGGATCC TCAGGGTGAC
GCTGCTCGGC TGACGGCAGC TGCAGCCCCT GACGTTTTTC TCGTGAACCG TGGTGACGAG
GCCGAGTGTG TCGCTCTTGC CTTGGCACGG GACCTCCGGG CCGCTGGGCT GCGGGTGGAG
TTGGATGGGT CGGGCTCGGC CTTCGGAAAG CAGTTCAAAC GGGCGGATCG AAGTGGTGCG
AGCTGGGCCA TGGTGCTCGG AGACGAGGAG GTCGAGCGCG GTGAGGTGCG CCTGAAGCGG
TTACAGCAGC AGGCTGAGGA ATCCACCGTT GCGCTTGCGC CAGTTGCCGC GATCGTGGAG
AAACTGCTCA CCCCCTGA
|
|---|
| Protein sequence | MLPPGRLSRC TCILHVSQLQ SLRGMVDLLP EVLQRWQAVE AKAREHFQRS GFGEIRTPLL
ETTDLFCRGI GEGTDVVGKE MYSFQDRGDR SCTLRPEGTA SVVRAALQHG LLSQGAQKLW
YAGPMFRYER PQAGRQRQFH QIGVEWLGAE RARSDVEVIA LAWDLLASLG VGGLQLELNS
LGTAEDRKAY RNALVAWLEQ RSEVLDPDSQ ARLSTNPLRI LDSKNKNTQA LLEDAPTLVD
ALSDASRERF EEVQRGLTSL GIHFLLNPRL VRGLDYYSHT AFEITSDQLG AQATVCGGGR
YDGLIGQLGG PQTPAIGWAL GMERLLLVLE AAAKADPQGD AARLTAAAAP DVFLVNRGDE
AECVALALAR DLRAAGLRVE LDGSGSAFGK QFKRADRSGA SWAMVLGDEE VERGEVRLKR
LQQQAEESTV ALAPVAAIVE KLLTP
|
|---|
| |