Gene Syncc9605_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0184 
Symbol 
ID3736264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp190921 
End bp192132 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID637774764 
ProductpolyA polymerase 
Protein accessionYP_380515 
Protein GI78211736 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.648939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0507556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTC CAGGTGTGCC GTCTTCCGTT CTGGAGGCGT TGCAGCGTGC TGGGCAATCA 
CGCGACGTTC GTTGTCTGGC CCTGGTTGGC GGCGTTGTCC GTGATCAGCT GCTGCATCAG
CGTTGTGGTC GCTCTTGGTC GGGTGTTCCT GATCTGGACT GGGTGGTCGA GGGTGATGCC
GCTGCCCTGG TGGCGGAGCT GGTCGTTCAG GTGGGCTCTG AACGCATCAG CGGTGTTCAG
GAGCATGGGG CCTTCGGAAC GGTGGCATTT CAGCTGGATG GGATTCCGCT TGATCTGGCC
ACAGCGCGAC AGGAGCACTA CCCCGCGCCA GCCGAGAATC CCATCGTGCG AGCCGGCACC
CTCGAGGCTG ACCTTGCTCG CCGGGATTTC ACGATCAATG CCATGGCCCT CGATCTGGTG
GCCGGTGAGC TGATCGATCT CCACCATGGC CAGGAGGACC TGGCCTCAGG CCAGATCCGC
TTTCTGCACG CGGGCAGCGT TCAGGACGAC CCAACCCGGG TCATTCGAGC TGCCCGTTAC
GCCGCTCGGC TGGGTTTCGA GCTTGCGAAG GAAAGCCGTG AGCAGATCCG CAGCACCATG
CAGCAGTGGC CCTGGGCCTG GGGCCAGGGC GATGCGGCGT TGACCGCACC GCCGGCCCTG
GCCAGTCGAC TGCGGATGGA GTTGGAGCGG CTGCTGGAGC GGGAACCCTG GCCGCAGGCG
TTGGACCTGT TGGAGCAGTG GCAAGCACTG CCGCTGTTGG ACGCCCAACT TCAGCGGGAT
CCTGGGCGCA CCCAGCGGCT GCATTGGGCC CGACGTCTGG GTCTCCCGTT AATGCCGGCG
CTGCTTGCAG GAGCAGCCGA TCCAGTCGCA CTCGCGGAAC GGTTGCAGAT TCCTGGTAAG
CAACAGCAAT GGTTGAAACA GTGCGGGGCC CTCTGCGACT GGCTGATGGA CAACCCCCCG
GTCCTGCAGG CCAGCCCATC GATCTGGTCG ACGGCCCTTG AGCAGAAGGG TTGGCAGCCG
GAGGCCGTGG CCCTGGCGGT CACCCTTCGG CCGAAGCAAT GGAGACCGCT GCTGCGCTGG
TGGGGCCGTT GGCGCAGGAT TCAGGCGCCG CAGACCGCGC GTAACCTGAT CGCTGCGGGT
TGGCAGCCGG GGCCGGCGAT CGGGGAGGAG TTGCGCAGGC AGCGCAGTGC AGCGCAGGAC
CGCAGCCGAT GA
 
Protein sequence
MDLPGVPSSV LEALQRAGQS RDVRCLALVG GVVRDQLLHQ RCGRSWSGVP DLDWVVEGDA 
AALVAELVVQ VGSERISGVQ EHGAFGTVAF QLDGIPLDLA TARQEHYPAP AENPIVRAGT
LEADLARRDF TINAMALDLV AGELIDLHHG QEDLASGQIR FLHAGSVQDD PTRVIRAARY
AARLGFELAK ESREQIRSTM QQWPWAWGQG DAALTAPPAL ASRLRMELER LLEREPWPQA
LDLLEQWQAL PLLDAQLQRD PGRTQRLHWA RRLGLPLMPA LLAGAADPVA LAERLQIPGK
QQQWLKQCGA LCDWLMDNPP VLQASPSIWS TALEQKGWQP EAVALAVTLR PKQWRPLLRW
WGRWRRIQAP QTARNLIAAG WQPGPAIGEE LRRQRSAAQD RSR