Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0169 |
Symbol | |
ID | 3735778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 172985 |
End bp | 175240 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637774749 |
Product | glycosyltransferase-like protein |
Protein accession | YP_380500 |
Protein GI | 78211721 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.672061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.17945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGATA TCGTTCTGCT TTCCACGGCC GACTGGGACC ATCCCTTGTG GACGAACAAG CAGCACACCG CGCTTTCCCT GTATCGGGCT GGCCACCGCG TGCTGTACAT CGAGTCTCTT GGTTTGCGTC CCCCGCGTGC TGATCGTCAG GACAGGCAGC GGATCGTCAA GCGTCTGAGG CGGATGTTCA GCCCTCCGCG CCAGGTTGAG CCCGGCTTGT GGATCTGGTC GCCGATGGTG ATTCCCGGTG GGACACGCGG GGTGTTGATG CGGATCAACC GGATGTTGTT CAGCGGCGCT CTGGCCTGGG TTCTCCGGAG TCTGCGTTTT CGCTCGCCAC TGTTGTGGAC GTACAACCCG CTGACCGGTC GTTATCTCAA CCTCAGACGA CGCGCAACAG CCTCGACGTC GTCGATGTTC TCCGCTGCTG TCTACCACTG CGTCGATCGC ATTCATGCCC AGCCAGGTAT GCCCGCGACC TTGATTGCTG ACAGCGAGCG CCAGTTGTGC CGCACGGTGA ATGTGGTGTT CACCACGTCT CCTGACCTTC AGGCGTCGTT GATGCGACTG AATGCCTGCA CATTCCACTA CGGCAACGTT GCCGATCAGG CCCATTTCGC TGCCGCCCTG GATGCGCCCT ATGCCCCGGA GCCTCTGGCT GGCATCCCGA AGCCTCGCTT GATGTTTGTC GGCGCGATCG ATGCCTACAA GCTTGATTTA CCCATGCTGA CGTCCCTCGC TCGTCGACGT TCGGAGTGGT CGTTCGTTCT GCTGGGCCCT GTTGGCGAGG CCGATCCGGA CACAAGCATT ACGGCCCTTG AGGCCTTGCC GAATGTGTAC GTCATGGGTT TGCAGCCCTA TGCCGATTTG CCGGCATGGC TCGCCCACGC CGATGTGGCT CTGCTGCCCC TGCAGGAGAA CACCTACACG CAGCACATGT TCCCGATGAA ATTCTTCGAA TACCTGGCAG CAGGAACACC CGTTGTGGCC ACCCGAATTC CGGCGTTGCG CCCCTACGCC GCTGGAGCGT TGCTTTGCCC TCCGGATGCG GAGGCATTCG ATGCCGCTAT CGCGACGGCA TTGGCGGGTG ACGGCCCACC TATACGGCAG CGCTTGGCGC TGGCCGCTGA ACACACTTAT GAGAGCCGCA CCCGCAAGAT GCTTGCTGAC CTGCAGCGGG AAGGATTGTT GGAAGCGGCC TCAAGTGGTC GCTCGATGCT GCGGGCCCAA GCCCGAACCT GGCCGTTGCA GCGGCTGTTG ATGCCGGCCT TGTTTCGCTC GGTGCGGTTG CGCAACCGAT GTGGACGCAG TGAAGCCGGA CGTCAGCTGT TGGGCTGGAT TGACGGGCAC CATCCGATTG AGCCGCAGGT GCTTGATGCA CAGATTCCCC GGCTAATCCA GAAAGGGCTG TATGCCGAGG CCTTGGCGCT GATGGAGCGG TCCTGGTTGG AGCTCGGCCG CACCGATCAC CTTCACCAGC TGTTGTTCCG CCGTGGCGCC AGGCCCAAGG CGCTGGAGGC GCAGATCGCC TTATTTGAGA CCCTCGGGTC CAGCACTCGC TTGCCCCTCA GCTACCGCAC TTACTGCAGG GTCGTCTCTG CTTACCGCGC TGCTGAAGCC AAGGATCCCC AGCTGATGCG TGCTTCGCTT GCAGCGTTGG ACGTTGTGGC AACAGGGCTG GAAAACGATC CCAACACACA TTTGTGTCGC CAGGGGAATC GCTTCAACCG CGCCAAGCTG CTGATTTCCT GTTATGCCAC CGCGCTGCGG CTTCAGCTCA CCCTGGCGGA TCGGCCCGGT GCTGCTCGCC TCGGGCGGCG CGCGCTGCAG TTCTGTGCAC GCCTCGATCT CACCATGATC GAAACCGATA CCTCCTTTCG GCTCACGCGG AATCTGATGC GCGTGCTGGC GATCAATGCT CTTGAGGCCT GGGCTTCAGC GGATGTCGCG CTCTACTGGC AGGCGAGGCA GGCGTTGCAA GCGGTTCATG ACCATGCCCA TCGACAGGAG CATGACGATC GCGAAGTGCA GGAAGACCAT CGTGCCTTCG CCGTCCAGGT GATGGAGCGT GTCGCTTTGA TGGACCCCGC CCTTGCTGAC GTGGCTGCGA GGCGCCGGGC CACCGAAGAT CTGATGCTGT TGCTGTTCCG CGCCAAGATC GTCAACGAGG CCTGGCGGAC CGAGCGGTTG CCGGGAGTTT TGCCTTGCTT CGAGGGCTTT CTTGAGCCTC ACCCTGCAAC GTCGAGTACG CCATGA
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Protein sequence | MPDIVLLSTA DWDHPLWTNK QHTALSLYRA GHRVLYIESL GLRPPRADRQ DRQRIVKRLR RMFSPPRQVE PGLWIWSPMV IPGGTRGVLM RINRMLFSGA LAWVLRSLRF RSPLLWTYNP LTGRYLNLRR RATASTSSMF SAAVYHCVDR IHAQPGMPAT LIADSERQLC RTVNVVFTTS PDLQASLMRL NACTFHYGNV ADQAHFAAAL DAPYAPEPLA GIPKPRLMFV GAIDAYKLDL PMLTSLARRR SEWSFVLLGP VGEADPDTSI TALEALPNVY VMGLQPYADL PAWLAHADVA LLPLQENTYT QHMFPMKFFE YLAAGTPVVA TRIPALRPYA AGALLCPPDA EAFDAAIATA LAGDGPPIRQ RLALAAEHTY ESRTRKMLAD LQREGLLEAA SSGRSMLRAQ ARTWPLQRLL MPALFRSVRL RNRCGRSEAG RQLLGWIDGH HPIEPQVLDA QIPRLIQKGL YAEALALMER SWLELGRTDH LHQLLFRRGA RPKALEAQIA LFETLGSSTR LPLSYRTYCR VVSAYRAAEA KDPQLMRASL AALDVVATGL ENDPNTHLCR QGNRFNRAKL LISCYATALR LQLTLADRPG AARLGRRALQ FCARLDLTMI ETDTSFRLTR NLMRVLAINA LEAWASADVA LYWQARQALQ AVHDHAHRQE HDDREVQEDH RAFAVQVMER VALMDPALAD VAARRRATED LMLLLFRAKI VNEAWRTERL PGVLPCFEGF LEPHPATSST P
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