Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0141 |
Symbol | |
ID | 3737326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 137429 |
End bp | 138148 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637774720 |
Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
Protein accession | YP_380472 |
Protein GI | 78211693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00561712 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0137195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATTC GTAAGTGTGT GGTGGCCGTT CCGGCCCGGC TTCAGTCATC TCGACTCCCC AACAAGGTGC TGGCCGACAT CGGCGGTAAG CCGATGATTC AGCGCGTGCT GGAACGCTGC AGTGAGGCTC AGGGTGTTGA AGCGGTGGTG CTGTGCACCG ACAGCACCGA ACTTCAGACC CTGGCTGAGG GTTGGGGGTT CCCAGTGTTG ATGACGTCGG AATCCTGCAA CTCCGGCAGT GAGCGCATCG CATCGGTGGC TCACCCTCTG ATGGCCCTGG GCTGGGGCGA TGCGGATCCT GTGGCTGAAG AGACCGCAGT GATCAACGTT CAGGGCGATC AACCGTTCAT CGAACCTGCT GTGATCGATG CCATGGCCGA GGAATTTCGG AGTCAGGATC CTGTGCCGGC GGTCGTGACC CCCGTCTACG GGCTGAAGCC CGAATCGGTC CACAATCCCA ATGTGGTGAA GACCCTGCTG GCCCATGACG GCCGTGCGCT CTATTTCTCA CGGTCCGCCA TCCCCCACGT GCGGGATATA GCTGAGGCGG ATTGGCATCA GCACACCACC TACTGGGGGC ATGTGGGCAT GTACGGCTTC CGGGGAGATG TATTGGCTGC ATGGGATCAG CTGCCGGCCT CACCATTGCC ACCTTCCGGG TCGAGGGCAC CTCGTTGTCG GTGGACACCG CCGAACAGCT GGAGCAGGCC CGGGCGATGA
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Protein sequence | MAIRKCVVAV PARLQSSRLP NKVLADIGGK PMIQRVLERC SEAQGVEAVV LCTDSTELQT LAEGWGFPVL MTSESCNSGS ERIASVAHPL MALGWGDADP VAEETAVINV QGDQPFIEPA VIDAMAEEFR SQDPVPAVVT PVYGLKPESV HNPNVVKTLL AHDGRALYFS RSAIPHVRDI AEADWHQHTT YWGHVGMYGF RGDVLAAWDQ LPASPLPPSG SRAPRCRWTP PNSWSRPGR
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