Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0120 |
Symbol | |
ID | 3737245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 117063 |
End bp | 118244 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637774699 |
Product | peptidase M20D, amidohydrolase |
Protein accession | YP_380451 |
Protein GI | 78211672 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000983179 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCCAAG CGGCGTCCCT GTCCGATCGA CTCAGCCGTG AGATGCCTGA GCTTCTGGAG CTGCGCCGGC ATCTGCATGC CCACCCTGAA CTCAGCGGTG AGGAACACCA GACCGCCGCC CTGGTCGCCG GTGAACTGCG TCAGCTGGGC TGGCGGGTCC GAGAGGGGGT TGGCCGCACG GGCCTGGTGG CCGAATTGGG GCCTGGCCAC GGCCCCACAG TGGGCTTGCG GGTGGACATG GATGCCCTGC CCGTAGAGGA GCGCACCGGT CTGAGCTATG CCTCCACCCG CCAGGGTCTG ATGCATGCCT GTGGCCACGA TCTGCACACC TGCACGGGCC TTGGTGTCGC ACGCTTGCTG GCGCAGGAGC CCCACTTAGG GGCTCGAGTG CGGCTGCTGT TTCAACCCGC CGAAGAGTTG GCACAGGGGG CGGTGTGGAT GAGGGATGCG GGGGCGGTGG AGGGTCTCGA TGCGTTGTAC GGCGTGCATG TGGTGCCGAA TCTGCCGGTG GGCACGGTGG GGATCCGGCG GGGCTGTCTC ACGGCGGCGG CCGGAGAGCT GGAGATCCTG GTGCAGGGAG AAGGTGGCCA TGGTGCCCGT CCCCATCAGT CGGTGGATGC GGTTTGGCTG GCGGCTCGGG TGATCACAGA GCTTCAACAG ACCATCGCCC GTCGCTTGGA CGCCTTACAG CCGGTTGTGA TCAGTTTCGG CAAGGTGGAG GGCGGTCGCG CCTTCAACGT GATCGCCGAT CAGGTGCGTT TGCTAGGCAC GGTGCGCTGT CTGGATCTGC AGCAGCACGC TCAGTTGCCG GCTTGGATTG ATGAGACGGT GCAGGGAATC TGTGCCAGTG GAGGGGGTAC GGCTTTGGTG AATTACCGCT GCATTGCACC ACCGGTGCAC AACGATCCGC AGCTCACGAC CTTGCTCGAA CGCTGTGCGG TGGAGTGCCT GGGGCGCGAC AAGGTGCTGC CGGTGGAGCA GCCCTCCCTG GGGGCGGAAG ACTTTGCTGA GCTGCTTCGG GATGTGCCGG GAATGATGGT GCGGCTGGGT GTGGCCGGGC CCGAGGGGTG TGCGCCGCTG CACAACGGAG CGTTCGCACT GGAGGAAGAC GCCCTCGGTG TTGGCATTGC GGTTCTCACG GCCACCGTGC TGGCGTGGAT CACGGAGAAC ACCTCGGCAT GA
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Protein sequence | MTQAASLSDR LSREMPELLE LRRHLHAHPE LSGEEHQTAA LVAGELRQLG WRVREGVGRT GLVAELGPGH GPTVGLRVDM DALPVEERTG LSYASTRQGL MHACGHDLHT CTGLGVARLL AQEPHLGARV RLLFQPAEEL AQGAVWMRDA GAVEGLDALY GVHVVPNLPV GTVGIRRGCL TAAAGELEIL VQGEGGHGAR PHQSVDAVWL AARVITELQQ TIARRLDALQ PVVISFGKVE GGRAFNVIAD QVRLLGTVRC LDLQQHAQLP AWIDETVQGI CASGGGTALV NYRCIAPPVH NDPQLTTLLE RCAVECLGRD KVLPVEQPSL GAEDFAELLR DVPGMMVRLG VAGPEGCAPL HNGAFALEED ALGVGIAVLT ATVLAWITEN TSA
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