Gene Syncc9605_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0114 
Symbol 
ID3735465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp110890 
End bp111843 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID637774693 
Producthypothetical protein 
Protein accessionYP_380445 
Protein GI78211666 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.204632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.161005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA GCCTGATCAA CCTCCATCCA TCGCCAGCAG ATCTGCAGCA GCTGGTGCAG 
GACGGCTTGA AGCGCAGCCC TCGGCAGCTC CCAGCCTGGC TGCTTTACGA CGCCGAGGGA
TCCCGGCTGT TCGCTGAGAT CTGCAAGCAA CCGGAATACA CACTCACCAA CCGGGAGATA
GCCCTGCTGG AGCTGCACGC TGACGCCATC GCCGCCGCCA CGGGCCCCGG AATGGTGGTG
GAATTCGGAA TCGGCAATGC CCGCAAGGTG GATCCGCTGC TCACAGCCCT CGGCAGCAGC
GTCTTCGCCG CCTTGGACAT CAGCCTCAGC GCCCTAAAGG AGGCCCTCTC CGGCCTCGCG
GCCCGGCACC CCAACACCGC CATGGTGGGC ATCTGCTGTG ACCACACCCG CCTTGAGCAG
CTACCGCAGC ATCCCGCCCT GAACGGCCAG CGGCGCATCG GCTTCTTTCC TGGCAGCTCC
CTGGGCAACT TCACCCCAGA GGAGGCTGTT GACTTTCTGC GCAATGCCCG GCAGCTGCTG
GCTGGAGGGC CGCTGCTGCT GGGGCTGGAT CAACCGCGGG AACAGTCCCT TATGGAAGCC
GCCTATGACG ATGCCGCCGG CTTCTCCGCC GCCTTCGCCC TCAACCTGCT GCAGCGGCTG
AACCGCGAGC TTCAGGGCGA TGCCGATCCC GCGCAGTTCC GCTACCGGGC CCGCTGGCAA
GAGCAGCAGC AACGGATCGA AATGGCGCTG GTGAGCACGC AGGATCAAAC CGTGCATCTG
GCCGGCGAAA CCTGGGTCTT CAAGAAAGAC GACGCCTGGA TCACTGAACA CAGCGTCAAA
TACTCCTCAG GAACTGCAGC CGACCTTGCA AACCAGGCCG GATGGCGGAT TGAGAGCAGC
TGGGAGGATC CGCACCAGCA AATGGCTCTG CATCTGCTTT TGCCGGCAGA CTGA
 
Protein sequence
MSISLINLHP SPADLQQLVQ DGLKRSPRQL PAWLLYDAEG SRLFAEICKQ PEYTLTNREI 
ALLELHADAI AAATGPGMVV EFGIGNARKV DPLLTALGSS VFAALDISLS ALKEALSGLA
ARHPNTAMVG ICCDHTRLEQ LPQHPALNGQ RRIGFFPGSS LGNFTPEEAV DFLRNARQLL
AGGPLLLGLD QPREQSLMEA AYDDAAGFSA AFALNLLQRL NRELQGDADP AQFRYRARWQ
EQQQRIEMAL VSTQDQTVHL AGETWVFKKD DAWITEHSVK YSSGTAADLA NQAGWRIESS
WEDPHQQMAL HLLLPAD