Gene Syncc9605_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0066 
Symboltig 
ID3737806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp63151 
End bp64560 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content62% 
IMG OID637774647 
Producttrigger factor 
Protein accessionYP_380400 
Protein GI78211621 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG CAGCCCTGAA GGTGACCACC GAAGCCCGCC CCAGCAGCCG CCTGGCGGTG 
ACGGTCACCG TTCCTGGGGA GCGCTGCAAG ACGAGTTACG AAGACGCCAT CACCAGCCTG
AGCCGCAGCA TCAACCTGCC GGGCTTCCGC AAGGGCAAGG TGCCGCGCAC GGTGCTGGTG
CAACAGCTAG GAGGCGTGCG GATCAAAGCC ACGGCTCTGG AAAAGCTGAT CGATAACGCC
TGGCGTGACG CCATCCAGCA GGAATCGCTG GAACCGATCA GTCAGCCTGA CCTGAGCAGT
GGTTTTGACG GCCTGCTGGA GAGCTTTGAG CCCGGCAAGG AACTCACCTT CACCCTGGAA
GCCGACGTCG CCCCGACGCC AAAGCTGAAA ACCACCAAGG GCCTGAAGGC GGAATTCGAA
ACCGTCGCCT ACGACGCCTC ACGCGTCGAC GCGATGATTG AGGACTCCCG CAAGCAAATG
GCCACGGTCG TTCCGGTGGA AGGTCGTGCC GCCCAGAACG GCGACATCGC TGTGCTCGGC
TTCAAAGGCA CCTACACCGA TGACGGCAGC GAGATCGAGG GCGGCAGCGC CGATTCGATG
GATGTGGACC TTGAAAATGG CCGGATGATC CCCGGCTTCA TCGAAGGGGT CATCGGCATG
AAGGTCGGCG AGACTAAAAC CGTGGATTGC CAGTTCCCTG ACGACTACCC GAAGGAGGAT
GCCCGCGGAC GTAAGGCCAG CTTCGAGATC GAACTGAAGG ACCTCAAGAC CCGCGAACTG
CCCGAGCTGG ATGACGAATT CGCCAAGCAG GCCAGCGAAC AGGAGACCCT GGCGGACCTG
CGCAAAGATC TGGAGCAGCG GCTCAAGGAC GACGCCGAAC GCCGTCAGAC CAGCAACCGC
CGCGATGCCC TCGTCGCCGC CCTGGTGGAG CAGCTCGAGG TTGAGCTGCC CGAAGCACTG
ATCCAACAGG AAAGCCGCAA CCTGCTGGAG CAGACCGCAG CCCAGTTCGC CCAGCAGGGC
ATGGATGTGA AGTCGCTGTT CACTCCTGAC CTGGTGCGCA ACCTGATGCA GAACTCCCGC
CCCGAGGCCG AAGAGCGTCT GCGCCGCAGT TTTGCCCTCA CCGCCCTGGC TGAAGCGGAG
GACATCAAGC TCGACGACAA GGCCGTGGAC GCCAAGATCA AGGAGGTGAA GAAAGAGCTC
TCCGCCGACG CCAAGATCGA TCCCGAGCGC TTGCGTCAGG CCGTTATGGA TGACCTGATT
CAAGACCGTC TGATGGGCTG GCTTGAGGAG AACAGCACCA TCACCGAGAA GGCGCCGGCA
GCTGACGACA GCAAGGCTGA AGCCAAGAAA AAGCCCGCTG CCAAGAAGGC CGAGGCCAAG
AGCAAGTCCA AGGCAGACGC CAAGGACTGA
 
Protein sequence
MSAAALKVTT EARPSSRLAV TVTVPGERCK TSYEDAITSL SRSINLPGFR KGKVPRTVLV 
QQLGGVRIKA TALEKLIDNA WRDAIQQESL EPISQPDLSS GFDGLLESFE PGKELTFTLE
ADVAPTPKLK TTKGLKAEFE TVAYDASRVD AMIEDSRKQM ATVVPVEGRA AQNGDIAVLG
FKGTYTDDGS EIEGGSADSM DVDLENGRMI PGFIEGVIGM KVGETKTVDC QFPDDYPKED
ARGRKASFEI ELKDLKTREL PELDDEFAKQ ASEQETLADL RKDLEQRLKD DAERRQTSNR
RDALVAALVE QLEVELPEAL IQQESRNLLE QTAAQFAQQG MDVKSLFTPD LVRNLMQNSR
PEAEERLRRS FALTALAEAE DIKLDDKAVD AKIKEVKKEL SADAKIDPER LRQAVMDDLI
QDRLMGWLEE NSTITEKAPA ADDSKAEAKK KPAAKKAEAK SKSKADAKD