Gene Syncc9605_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0057 
SymbolrplT 
ID3735581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp53670 
End bp54017 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content61% 
IMG OID637774638 
Product50S ribosomal protein L20 
Protein accessionYP_380391 
Protein GI78211612 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG TCAAGAGAGG CAACGTCGCC CGTAAACGCC GCAACAAGAT CCTGCGGCTG 
GCCCGTGGCT TCCGTGGTGG CAACGGAACC TTGTTCCGTA CAGCAAACCA GCGGGTGATG
AAAGCCCTCT GCAACGCCTA CCGCGATCGT CGTCGTCGTA AGCGCGATTT CCGTCGCCTC
TGGATTGCTC GCATCAACGC CGCTGCCCGT CTGAATGGTG TGAGCTACAG CCGTCTGATG
GGCGGTCTTA AGAAGGCCGA TGTGCGCCTG AATCGCAAGA TGCTGGCTCA GCTTGCGGTC
GTTGACCCCG GTAGCTTCAC CAACGTCGTG GCTGCAGCTA AGAGCTGA
 
Protein sequence
MARVKRGNVA RKRRNKILRL ARGFRGGNGT LFRTANQRVM KALCNAYRDR RRRKRDFRRL 
WIARINAAAR LNGVSYSRLM GGLKKADVRL NRKMLAQLAV VDPGSFTNVV AAAKS