Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0057 |
Symbol | rplT |
ID | 3735581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 53670 |
End bp | 54017 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637774638 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_380391 |
Protein GI | 78211612 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCG TCAAGAGAGG CAACGTCGCC CGTAAACGCC GCAACAAGAT CCTGCGGCTG GCCCGTGGCT TCCGTGGTGG CAACGGAACC TTGTTCCGTA CAGCAAACCA GCGGGTGATG AAAGCCCTCT GCAACGCCTA CCGCGATCGT CGTCGTCGTA AGCGCGATTT CCGTCGCCTC TGGATTGCTC GCATCAACGC CGCTGCCCGT CTGAATGGTG TGAGCTACAG CCGTCTGATG GGCGGTCTTA AGAAGGCCGA TGTGCGCCTG AATCGCAAGA TGCTGGCTCA GCTTGCGGTC GTTGACCCCG GTAGCTTCAC CAACGTCGTG GCTGCAGCTA AGAGCTGA
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Protein sequence | MARVKRGNVA RKRRNKILRL ARGFRGGNGT LFRTANQRVM KALCNAYRDR RRRKRDFRRL WIARINAAAR LNGVSYSRLM GGLKKADVRL NRKMLAQLAV VDPGSFTNVV AAAKS
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