| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0052 |
|---|
| Symbol | |
|---|
| ID | 3735576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 50149 |
|---|
| End bp | 51345 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637774633 |
|---|
| Product | UDP-sulfoquinovose synthase |
|---|
| Protein accession | YP_380386 |
|---|
| Protein GI | 78211607 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGTTC TCGTTCTCGG CGGTGACGGC TTCTGCGGCT GGCCCTGTGC GGTGAACCTG
GCGGATCAGG GCCACGATGT TCTGATCGTG GACAACCTCA GCCGTCGCAA GATCGACATC
GACCTTGAAG TTGAGTCGCT GACGCCGATC GTGAGCATCG GTGAGCGCCT CAAAGCCTGG
GAGGAGACCG GGGGCAAGCC GATGAGGTTT GTCCACATGG ACATCGCCCA TGAGTACCAG
CGGTTGCTGG ATCTGCTTCA CGAGGAGCGC CCGGATTCCG TGGTCCACTT CGCTGAACAG
CGGGCCGCCC CCTATTCGAT GAAGAGCAGC GCCACCAAGC GCTACACCGT CGATAACAAC
GTCAACGGCA CCCACAATCT GCTGGCCGCC ATCGTTGAAA GCGGTCAAGA CATCCACGTG
GTGCATCTGG GCACCATGGG CGTCTACGGC TATGGCTCCC ACCGCGGCGC CACCATCCCC
GAGGGATATC TCAAGGTGGA AGTGCCCCAG CCCGACGGCA GCCGCTTCGA AGAGGAAATC
CTCCACCCGG CAAGCCCAGG CAGCGTCTAT CACATGACCA AGACGCTCGA CCAGCTGCTC
TTCCTCTACT ACAACAAAAA CGACAAGGTC CGCATCACCG ACCTGCACCA GGGCATCGTC
TGGGGAACCA ACACCGATGC AACCGACCGT GACCCGCGGC TCACAAATCG CTTCGATTAC
GACGGCGATT ACGGCACGGT GCTGAACCGC TTCCTGATGC AAGCCGCCAT CGGCTACCCG
CTTACCGTTC ATGGAACCGG GGGCCAGACC CGGGCCTTCA TCCACATCCG CGATTCCGTG
CGCTGCGTTC AGCTGGCGCT GGAAAACCCT CCGGAACAAG GGGAGCGGGT AAAGATTTTC
AACCAGATGA CCGAAAGCCA TCAAGTTGGC GAACTGGCCA AGAAGGTGGC CGCCCTCACC
GGCGCTCAGG TCAATAACTT GCCGAATCCC CGCAATGAAG CGGTGGAGAA CGATCTGATC
GTGGACAACC GCTGCTTCAT CGAGCTGGGC CTCAACCCCA CAACCCTCGA TGACGGCCTG
CTGAAGGAAG TGTTGGAGAT TGCCACCCGC TACGCGGACC GTTGCGACCG CAACCGCATC
CTCTGCACCT CCGCCTGGAC CAATACCCAG GCCCAGGCCA TCGGCACCGC GTCCTGA
|
|---|
| Protein sequence | MKVLVLGGDG FCGWPCAVNL ADQGHDVLIV DNLSRRKIDI DLEVESLTPI VSIGERLKAW
EETGGKPMRF VHMDIAHEYQ RLLDLLHEER PDSVVHFAEQ RAAPYSMKSS ATKRYTVDNN
VNGTHNLLAA IVESGQDIHV VHLGTMGVYG YGSHRGATIP EGYLKVEVPQ PDGSRFEEEI
LHPASPGSVY HMTKTLDQLL FLYYNKNDKV RITDLHQGIV WGTNTDATDR DPRLTNRFDY
DGDYGTVLNR FLMQAAIGYP LTVHGTGGQT RAFIHIRDSV RCVQLALENP PEQGERVKIF
NQMTESHQVG ELAKKVAALT GAQVNNLPNP RNEAVENDLI VDNRCFIELG LNPTTLDDGL
LKEVLEIATR YADRCDRNRI LCTSAWTNTQ AQAIGTAS
|
|---|
| |