| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0010 |
|---|
| Symbol | nusB |
|---|
| ID | 3735533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 11872 |
|---|
| End bp | 12507 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637774593 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_380347 |
|---|
| Protein GI | 78211568 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAC GATCCCTCAC ACGCGAGCTG GCCTTGCTGG TGCTTGGTCA GGTGCCGGAA
CAGAGGTCAG CCTCAGTCGC TGACCTGGCC CTTGATTCGA TCCTGGACCA AGCCCTCGAC
ACCCTCACTC AGCACTGGCG TGAGTCGCTT GATGCCAGTG CTGCAGAGCT CGATCAGGCG
CAGCAGTCCC TGCTGGACAG CGAGCTGCAG CAGGGCGAAC CAGGAACCCA TGACACCGTC
CGCACCCATC TTCGCGCCTC TTTGAGTTCT GCTGAACAGG TCTTGAATGG TTTGTCCGCC
AGTCTTGAGT TGCCTCGGCT GTTGTTGCTT GGCGACCAGG AGCAGATCCG CCGCGGCGCC
ATGGAGCGGG TTCAGAAGGT GCTCACCCAG CGCGAGGGCA TCGACAAACG GTTGGATCAG
GTGATGGAGG GCTGGAGACT GACCCGGCTT CCGCGGATCG ATCGGGACAT CCTCCGATTG
GCTGTCGTTG ACCTGGAAAG CCTGCGCACT CCTGCTCCGG TGGCCTTCAA CGAGGCGGTT
GAGCTGGCCA ACCGTTACAG CGATGAGCAG GGTCGCCGGA TGATCAATGG TGTGTTGCGT
CGTTTCCACG ACGCTCAATC GAAAGCATCG GCCTGA
|
|---|
| Protein sequence | MATRSLTREL ALLVLGQVPE QRSASVADLA LDSILDQALD TLTQHWRESL DASAAELDQA
QQSLLDSELQ QGEPGTHDTV RTHLRASLSS AEQVLNGLSA SLELPRLLLL GDQEQIRRGA
MERVQKVLTQ REGIDKRLDQ VMEGWRLTRL PRIDRDILRL AVVDLESLRT PAPVAFNEAV
ELANRYSDEQ GRRMINGVLR RFHDAQSKAS A
|
|---|
| |