| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4924 |
|---|
| Symbol | |
|---|
| ID | 6119305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5925427 |
|---|
| End bp | 5926536 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641636509 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_001763268 |
|---|
| Protein GI | 170729242 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000928256 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATTT GGCAGCAGGC TGATTGGCCT AATTTTCATT GGGATAGCAG CAAAGTCTCG
CAGTTACTGC GTCAGATTAA CTTCAATCAA GGTCTACTTC TTGGCAAGTT AGATCAAGAC
CCTTCAGTCC AAATCACACT CGATACGCTT TTGGCGAACA TCATACATTC AAGCGCTATT
GAAGGTGAAA AGCTCAATGC CTTCTCGGTA CGCTCATCCT TAGCCAATAA ACTTGGTGTC
AGTGACAAAA AGCCATTCCC CACCACAGTG CAAACTGATG GCCTGGCAGA GATGACCTTA
GATGCATTGC AAAATTGGCA ATCAGAGTTA ACCTTAACGC GAATACTAAA CTGGCATCAT
CTACTATTCC CTGAAGGCCA TAGTCTATTT AACTCTATCC AAGGTGGAAC CTTACGGGGA
GAGGAGCCAA TGCAAGTGGT ATCGGGCCGT ATAGATAAGC CCAAAGTACA CTTCGAAGCG
CCTCCTCGCT CAATACTCGA TGGAGAACTT GAGCAGTTTA TTGCTTGGTT TAATCACTCT
CGTCACGATA CTGATCTAGA TCCCTTAATT CGTGCGGCAA TTACACATCT ATGGTTTGTG
ACCTTGCACC CTCTCGATGA TGGTAATGGC CGTATAACTC GACTACTTAC AGACTTAGCC
CTAACCCAAG CTGAACACAG GTCAATCCGT TTTTATGCCA TGTCTGTTAC TGTGTTAGAG
CGCCGCCAAG CCTATTACGA GATGCTAGAA ACAAGCCAGA AAGGTGAACT CGATATAACA
ACTTGGCTTG TCTGGTTCTT AGATACACTC AACGCGAGTT TACAAAAATC ATTAGACGAT
ATAGCGCAAA CTATAGCCAA AACCAACTAC TGGCAACGAG TCGATCAGAC ATTAAGTGGT
AAAAAGCTGA CAACTGAGCA AGTCAAAGTG CTTAATCGGC TTTTAGACGG TGAGTTTGAG
CTTGGAATTA GCAGTAGCCA GTACCAAAAG GTCGCTAAAG TAAGCCGTGC AACAGCCACA
CGTCATTTAG CCCAGTTAGT TGAACAAAAG TGTTTGGTTA AGGCCGATGC TGGTGGGCGA
AGTACCCGTT ACTTGCTAGC TAGCAAGTAA
|
|---|
| Protein sequence | MWIWQQADWP NFHWDSSKVS QLLRQINFNQ GLLLGKLDQD PSVQITLDTL LANIIHSSAI
EGEKLNAFSV RSSLANKLGV SDKKPFPTTV QTDGLAEMTL DALQNWQSEL TLTRILNWHH
LLFPEGHSLF NSIQGGTLRG EEPMQVVSGR IDKPKVHFEA PPRSILDGEL EQFIAWFNHS
RHDTDLDPLI RAAITHLWFV TLHPLDDGNG RITRLLTDLA LTQAEHRSIR FYAMSVTVLE
RRQAYYEMLE TSQKGELDIT TWLVWFLDTL NASLQKSLDD IAQTIAKTNY WQRVDQTLSG
KKLTTEQVKV LNRLLDGEFE LGISSSQYQK VAKVSRATAT RHLAQLVEQK CLVKADAGGR
STRYLLASK
|
|---|
| |