Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4900 |
Symbol | |
ID | 6119281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5895125 |
End bp | 5896666 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641636485 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_001763244 |
Protein GI | 170729218 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0995639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.22979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAAC AGCGGATCGA GCAGTTCGAA GTCGTTAGTG AAGCTCGCAA CGAAGGTACT ATCGTTGCAG TTAGTGACGG CATCATCCGC ATCCACGGCC TAGCCGACGT GATGCAAGGT GAAATGATCG AGCTGCCTGG TAACCGTTTC GCAATCGCGT TGAACTTAGA ACGTGATTCT GTCGGTGCCG TAGTTATGGG CCCTTATGCC TCTTTGGCTG AAGGCGACAA AGTAAAAACA ACTGGTCGTA TTTTGGAAGT CCCAGTTGGC CGTGGTCTTT TAGGTCGCGT AGTCAACACA TTGGGTGAGC CAATCGACGG AAAAGGACCT ATCGATAACG ATGGTTTCTC TCCTGTTGAA ATGATCGCAC CAGGTGTTAT TGAACGTAAG TCAGTAGATC AACCAGTACA AACTGGTTAT AAAGCCGTTG ACTCTATGAT CCCTATCGGT CGTGGACAGC GTGAGTTGAT CATTGGTGAC CGTCAGATCG GTAAAACCGC TCTAGCGATC GATGCCATCA TCAACCAAAA AGATACTGGC ATTAAGTGTG TATACGTAGC TGTAGGCCAG AAGGCTTCTA CAATTGCTAA CGTGGTACGC AAGCTAGAAG AACATGGCGC TTTGGCGAAC ACCATTGTTG TTGTTGCTAC AGCTTCTGAA GCTGCTGCTC TACAATATTT GGCTCCATAC TCTGGTTGTT CAATGGGTGA GTACTTCCGC GACCGCGGTG AAGATTCACT GATTGTCTAT GATGATCTTT CTAAGCAAGC AGTTGCTTAC CGTCAGATCT CATTGCTACT TAAGCGTCCA CCAGGACGTG AAGCATACCC AGGTGATGTA TTCTATCTTC ACTCTCGTCT GTTAGAGCGT GCTTCACGTG TTAACGCCGA GTATGTTGAG AAGTTCACTA AAGGTGAAGT GAAAGGCCAA ACTGGTTCTT TGACTGCTCT GCCGATTATT GAAACTCAAG CGGGTGACGT ATCTGCATTC GTACCGACCA ACGTAATTTC GATTACCGAT GGTCAGATCT TCCTTGAAAC TGACCTATTT AACTCTGGAC TACGTCCAGC TGTTAACCCA GGTATTTCGG TTTCTCGTGT TGGTGGTGCG GCTCAGACTA AGATCATCAA GAAACTGTCT GGCGGTATTC GTAGCGCACT AGCACAGTAT CGAGAGCTTG CAGCGTTCTC ACAGTTTGCA TCTGACTTAG ATGATGCAAC ACGTGCTCAG CTTGAGCATG GTGAGCGTGT TACTGAACTT ATGAAGCAAA AACAATACGC CCCTATGAGC GTAGCTGATC AGTCTGTGTC TATTTTCTCA GCTGAAAAAG GTTACCTAAA GAGCGTAGAG CTTAATAAGA TTGGTGATTT CGAAGCGTCT TTGCTCTCTT ACATGAACAG CGAGCATGCT GACCTTATGA AGACCATCAA CGAGACTGGC AACTACAATG CCGACATCGA AGGTGAGTTG AAGGCTGGCC TCGACAAGTT CGTCGAAACT CAAACCTGGT AA
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Protein sequence | MQLNSTEISD LIKQRIEQFE VVSEARNEGT IVAVSDGIIR IHGLADVMQG EMIELPGNRF AIALNLERDS VGAVVMGPYA SLAEGDKVKT TGRILEVPVG RGLLGRVVNT LGEPIDGKGP IDNDGFSPVE MIAPGVIERK SVDQPVQTGY KAVDSMIPIG RGQRELIIGD RQIGKTALAI DAIINQKDTG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TIVVVATASE AAALQYLAPY SGCSMGEYFR DRGEDSLIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER ASRVNAEYVE KFTKGEVKGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRSALAQY RELAAFSQFA SDLDDATRAQ LEHGERVTEL MKQKQYAPMS VADQSVSIFS AEKGYLKSVE LNKIGDFEAS LLSYMNSEHA DLMKTINETG NYNADIEGEL KAGLDKFVET QTW
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