Gene Swoo_4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4877 
Symbol 
ID6119254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5863616 
End bp5865160 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content47% 
IMG OID641636458 
Productphosphoglyceromutase 
Protein accessionYP_001763221 
Protein GI170729195 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0696] Phosphoglyceromutase 
TIGRFAM ID[TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GCAAACGCCC CTTGGCATTG CTGATCCTCG ACGGCTGGGG TTACCGTGAA 
AATACGCAAA AAAATGCTGT ATTTCACGCA AACACTCCAG TCCTAGATCG ACTCAACGCC
CAATACCCGA ATAGCCTGAT CTCCGGTTCT GGCTTAGATG TAGGCTTACC CGATGGACAG
ATGGGTAACT CTGAAGTTGG CCATATCAAC ATAGGCTCAG GCCGCATTGT TTATCAGGAA
CTAACCCGAA TTGGTAAAGC AATCGATGAC GGTGAATTTG ATGAAAATCC AGCACTTATC
GAAGCTGTAG ATAAAGCCAT TGCAAACAAT GGCGCAGTTC ATGTGATGGG GCTTTTGTCA
CCCGGTGGTG TCCATAGCCA TGAAAGCCAT ATCGAAGCCA TGTGCCGCCT AGCAGTAAAA
CGTGGTGCTA AGCAGGTTTA TCTGCATGCT TTCCTCGATG GACGTGATAC CCCCCCTCGT
AGTGCAAAGT CCAGCTTAGC TCATTTTGAT GATCTTTTTA CTACATTAGG CACTGGTCGT
GTGGCCTCGA TTATTGGCCG TTACTACGCC ATGGATCGCG ACAATCGCTG GGATCGAGTA
TCTCAAGCCT ACGATTTAAT CACTCAAGGT AAGTCACTAC ATCAGTACTC AAATGCTGTT
GAAGCACTTG AAGCCGCATA TGGCCGTGAT GAAAATGATG AGTTTGTTGG CAGCTCTGCA
ATTACTGATG CTCAAGGCAA CTCAGCTAAG CTCAATGATG AAGATGCCCT TATCTTTATG
AACTTCCGTG CAGATAGAGC ACGCCAGATC ACCCGTAGTT TTGTGGACAG TGATTTTGAT
GGTTTTACCC GAGAGGTAAC ACCTAAAGCT CATTTTGTGA TGCTGACAGA GTATGCCGCC
GACATTAATG CCGCTATCGC TTACCCATCT ACTGATCTGG TCAATACCTT AGGGGAAGTG
CTACAAAAAG AAGGTAAGAC CCAGCTACGC ATCTCAGAAA CAGAGAAGTA TGCTCATGTG
ACTTTCTTCT TCAATGGTGG CAAAGAGCAG CCTTTTAATG GTGAAGATAG GATCCTTATC
CAATCACCTA AAGTCGCCAC TTACGATCTG CAACCAGAGA TGAGTTCAGA AGAGCTAACC
GATAAGCTAG TCGGGGCGAT CGAATCAACC AAATATGATG TAATTATCTG TAACTACCCG
AATGGTGATA TGGTAGGTCA TACGGGGAGT TTCGAGGCAG CGGTACAAGC CTGTGAAGCG
GTAGATTCCT GTATTGGTCG TGTTGTCGAT GCCTTAGCAA AAGTCGATGG GGAGTGTTTA
ATTACTGCTG ACCACGGTAA TGCTGAGCAG ATGACGGATG AATCAACAGG TCAGGCTCAT
ACGGCTCACA CAAGTGAGTT AGTGCCATTG ATCTATGTTG GACGTAACGG CACTATTCAG
GAGGGCGGAC GATTAAGCGA TCTTGCCCCA ACCATGTTAA CCTTGATGGG ACAAGATGTG
CCATCAGAGA TGACTGGCCG CTCAATAATA AAACTCGATG AGTAA
 
Protein sequence
MTTRKRPLAL LILDGWGYRE NTQKNAVFHA NTPVLDRLNA QYPNSLISGS GLDVGLPDGQ 
MGNSEVGHIN IGSGRIVYQE LTRIGKAIDD GEFDENPALI EAVDKAIANN GAVHVMGLLS
PGGVHSHESH IEAMCRLAVK RGAKQVYLHA FLDGRDTPPR SAKSSLAHFD DLFTTLGTGR
VASIIGRYYA MDRDNRWDRV SQAYDLITQG KSLHQYSNAV EALEAAYGRD ENDEFVGSSA
ITDAQGNSAK LNDEDALIFM NFRADRARQI TRSFVDSDFD GFTREVTPKA HFVMLTEYAA
DINAAIAYPS TDLVNTLGEV LQKEGKTQLR ISETEKYAHV TFFFNGGKEQ PFNGEDRILI
QSPKVATYDL QPEMSSEELT DKLVGAIEST KYDVIICNYP NGDMVGHTGS FEAAVQACEA
VDSCIGRVVD ALAKVDGECL ITADHGNAEQ MTDESTGQAH TAHTSELVPL IYVGRNGTIQ
EGGRLSDLAP TMLTLMGQDV PSEMTGRSII KLDE