| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4798 |
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| Symbol | |
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| ID | 6119175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5784343 |
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| End bp | 5785800 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641636379 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001763142 |
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| Protein GI | 170729116 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00393558 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAAAGG CAGTATGGAG TGATAAGAAG CGGTTTATCT GGATCCTATC GGTTCTTTTG
CTAACGGCAT TTATTTTTAC TAGTGGTATC AGTTATAAAG TTGCTCACGA CTCTCTGAGT
GAGCAGATTT CAGAGAATAC TTTACCTCTC ACCAGCGACA ATATCTATTC AGAGATCCAG
CAAGATCTAT TACAACCTAT CTTTATCTCC TCATTAATGG CGCAAGACAC CTTTGTTAGA
GATTGGACCA TCAATGATGA GGAGGACCCT CAGCAGTTGA TCCGTTATCT GAGAGAGATT
CAAAATAAAT ACGATACCGT CACTAGTTTT TTTGTCTCAG AGAAAAGTCG AAAGTATTAC
CACTCCACAG GTGTGCTAAA AAAGATTGAA GATACAGCTC CCAATGATGC TTGGTATTTT
CGTGTTCGCT CGCTGCCAAC ATCTGAATCC TATGAGGTGA ATATCGATCT TGATACAGCA
AATAGAACCC GTACCGTTGT CTACGTTAAC TATAAAGTAC ATGACTTTGA AGGGAATTTT
ATCGGTGTGA CTGGTGTTGG ATTAGCGGTA GAGCGGGTGC AAAAGCTGAT AAAACTCTAT
CAGCAACGTT ATAACCGCCG AGTTTATTTT GTCGATACCG AGGGGCACGT AACCCTGCAT
GGAGAGCAGT ATTCAGGCAG TCAGACACTG CAAAACTCAC CGGGACTCGA GAAGTATGCC
ACCCGTATTT TGACCAGCCC TAGCGCCTCT TTCTCCTATG TTAGAGATAA TAAAACTGTC
TATCTGAACT CACGTATGGT GTCTGATTTT AAATGGTACT TGATGGTTGA GCAGGAGGAG
GCAGAGGGAG AGAAGAAGAT TTTAAATACC TTCTGGGTCA ACATAGTGCT TGGCTTGATG
GTTATTGTTG TGATTTTAGT GATTGCGAAT TTGACCTTAG GTCGTTACCA GAGAAAGTTA
GAGGTGATGG CGTCGACAGA TAAGCTTACT GGCGCTACCA ACCGGCAGAT GTTTGAGGAG
TATTTCTCCC ACTCCCTACA AAACGCCGAA ATCTCAGCCA CACCTGTGTC GGTTATTTTA
TTGGATATTG ATTACTTTAA GAGTGTGAAT GATAACTTTG GCCACAGTAT TGGTGATCTG
GTGATTAAGA CGGTGGCAAA TATAATCCGG CGTCAATTAA GGAGCGAAGA TATTGTCTGT
CGCTGGGGCG GAGAGGAGTT TCTACTGCTT CTACCTAATA TCGACCTTAG TCATGCCGCG
GATATGGCGG AGAGAATTAG GGAGTCGATA GCCGAGCGAA AAATCAGTGT TAATGAACAT
GAGATCGGCA TAACTGTCAG CTCAGGTGTT GCACAATATA AGCTAGGTGA GCCAAGAGCC
GATCTGATCA ACCGAGTAGA TGTTGCACTT TATCAGGCAA AAGATAGAGG ACGCGATCAG
GTGGTGCTAT CTCATTAG
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| Protein sequence | MGKAVWSDKK RFIWILSVLL LTAFIFTSGI SYKVAHDSLS EQISENTLPL TSDNIYSEIQ
QDLLQPIFIS SLMAQDTFVR DWTINDEEDP QQLIRYLREI QNKYDTVTSF FVSEKSRKYY
HSTGVLKKIE DTAPNDAWYF RVRSLPTSES YEVNIDLDTA NRTRTVVYVN YKVHDFEGNF
IGVTGVGLAV ERVQKLIKLY QQRYNRRVYF VDTEGHVTLH GEQYSGSQTL QNSPGLEKYA
TRILTSPSAS FSYVRDNKTV YLNSRMVSDF KWYLMVEQEE AEGEKKILNT FWVNIVLGLM
VIVVILVIAN LTLGRYQRKL EVMASTDKLT GATNRQMFEE YFSHSLQNAE ISATPVSVIL
LDIDYFKSVN DNFGHSIGDL VIKTVANIIR RQLRSEDIVC RWGGEEFLLL LPNIDLSHAA
DMAERIRESI AERKISVNEH EIGITVSSGV AQYKLGEPRA DLINRVDVAL YQAKDRGRDQ
VVLSH
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